RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PRAMEF19Q5SWL8 479 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 ARL6IP4Q66PJ3 421 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 KIAA0895LQ68EN5 471 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 LAYNQ6UX15 382 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 CLEC17AQ6ZS10 378 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 C14orf80Q86SX3 495 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 TTC8Q8TAM2 541 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 CAGE1Q8TC20 777 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 KCNG4Q8TDN1 519 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 ACTRT2Q8TDY3 377 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 KBTBD7Q8WVZ9 684 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 SLC46A1Q96NT5 459 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 INPP4AQ96PE3 977 aaPredicted RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 NELL2Q99435 816 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 SDF4Q9BRK5 362 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 ZNF577Q9BSK1 485 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 SPATA5L1Q9BVQ7 753 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 RAB34Q9BZG1 259 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 FTOQ9C0B1 505 aaKnown RBP eCLIP4.91□□□□□ -1.62
USP48-211ENST00000526044 AMBRA1Q9C0C7 1298 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 TTC12Q9H892 705 aaPredicted RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 AGO4Q9HCK5 861 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 PDGFCQ9NRA1 345 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 TBC1D22BQ9NU19 505 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 FLRT1Q9NZU1 646 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 FBXO9Q9UK97 447 aaPredicted RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 SRPRBQ9Y5M8 271 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 DDX49Q9Y6V7 483 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 ASTN1O14525 1302 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 CCDC151A5D8V7 595 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 VWA3AA6NCI4 1184 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 VSTM5A8MXK1 200 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 MYO1CO00159 1063 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 SLC37A4O43826 429 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ATP9AO75110 1047 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 OR52Z1P0C646 297 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ATXN1LP0C7T5 689 aaKnown RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 TXNP10599 105 aaKnown RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 KITP10721 976 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 LMO1P25800 156 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 CD6P30203 668 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 PLA2G5P39877 138 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 PRPHP41219 470 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ME1P48163 572 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 RARRES1P49788 294 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ARFIP2P53365 341 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 SP2Q02086 613 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TNFAIP2Q03169 654 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 PKN2Q16513 984 aaKnown RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 IL17AQ16552 155 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 LY6KQ17RY6 165 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TMEM266Q2M3C6 531 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 RBM20Q5T481 1227 aaKnown RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 LRCH2Q5VUJ6 765 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 KAZNQ674X7 775 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ADALQ6DHV7 355 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 SFRP4Q6FHJ7 346 aaPredicted RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 DPY19L2P1Q6NXN4 242 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ZNF783Q6ZMS7 281 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 SRGAP1Q7Z6B7 1085 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 FBXO16Q8IX29 292 aaPredicted RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 OR6B3Q8NGW1 331 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ETNPPLQ8TBG4 499 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 MYCBPAPQ8TBZ2 947 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 SCFD2Q8WU76 684 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TRIB2Q92519 343 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 GJA10Q969M2 543 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 RIT2Q99578 217 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ARPC5LQ9BPX5 153 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 SENP7Q9BQF6 1050 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TEKT3Q9BXF9 490 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TRIM54Q9BYV2 358 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TPSD1Q9BZJ3 242 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TTYH3Q9C0H2 523 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 SYNPO2LQ9H987 977 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 MLXIPQ9HAP2 919 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ATP6V0A4Q9HBG4 840 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 KCNMB3Q9NPA1 279 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 XPR1Q9UBH6 696 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 LRWD1Q9UFC0 647 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ZNHIT2Q9UHR6 403 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 NRBP1Q9UHY1 535 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ZHX1Q9UKY1 873 aaPredicted RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 PCDHA7Q9UN72 937 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 TNFRSF18Q9Y5U5 241 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 MORC2Q9Y6X9 1032 aaPredicted RBP4.9□□□□□ -1.63
USP48-211ENST00000526044 NFASCO94856 1347 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 ZNF236Q9UL36 1845 aa4.9□□□□□ -1.63
USP48-211ENST00000526044 CFAP69A5D8W1 941 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 DDX39AO00148 427 aaKnown RBP4.89□□□□□ -1.63
USP48-211ENST00000526044 BTN3A1O00481 513 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 KIAA0355O15063 1070 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 SEPT4O43236 478 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 TBC1D4O60343 1298 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 PSMD10O75832 226 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 GH1P01241 217 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 CYP2C9P11712 490 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 BMP5P22003 454 aa4.89□□□□□ -1.63
USP48-211ENST00000526044 CMA1P23946 247 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms