RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 GPR63Q9BZJ6 419 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 PLEKHA2Q9HB19 425 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 CYP4F11Q9HBI6 524 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 OLA1Q9NTK5 396 aaKnown RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 SEMA5BQ9P283 1151 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 CCNL1Q9UK58 526 aaPredicted RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 TRPC5Q9UL62 973 aaPredicted RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 SLC12A4Q9UP95 1085 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 PCDHA10Q9Y5I2 948 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 RAB3GAP2Q9H2M9 1393 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 TRPM2O94759 1503 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 LTBP4Q8N2S1 1624 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 COL4A3Q01955 1670 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3DA0A087WVF3 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3IA0A087WXS9 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3EA0A087X179 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3KA0A087X1G2 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3BA6NDS4 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3FA6NER0 549 aaPredicted RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 C3orf70A6NLC5 250 aaPredicted RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3LB9A6J9 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 H0YIZ8 118 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 RTCAO00442 366 aaKnown RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 SUV39H1O43463 412 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TTLL1O95922 423 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 NPSP0C0P6 89 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3HP0C7X1 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 CHN1P15882 459 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 NDUFB7P17568 137 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 CASQ1P31415 396 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 HPDP32754 393 aaPredicted RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 GRK5P34947 590 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 ADRA1BP35368 520 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 ATP6V1E1P36543 226 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 RCAN1P53805 252 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 DRG2P55039 364 aaKnown RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 UBASH3AP57075 661 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 GPC5P78333 572 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 CFHR3Q02985 330 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 LMAN2Q12907 356 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 MPP3Q13368 585 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 LSM12Q3MHD2 195 aaKnown RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 AARS2Q5JTZ9 985 aaKnown RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 NAA35Q5VZE5 725 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3GQ6DHY5 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3CQ6IPX1 549 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 WDR93Q6P2C0 686 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 Q6YL49 198 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 IQCA1Q86XH1 822 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 TBC1D3Q8IZP1 549 aaPredicted RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 CCDC191Q8NCU4 936 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 ZMIZ2Q8NF64 920 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 MGARPQ8TDB4 240 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 KAZALD1Q96I82 304 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 NCAPGQ9BPX3 1015 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 RNF26Q9BY78 433 aaPredicted RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 ZWILCHQ9H900 591 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 ABHD10Q9NUJ1 306 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 IRAK4Q9NWZ3 460 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 WDR35Q9P2L0 1181 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 AASSQ9UDR5 926 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 RAB21Q9UL25 225 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 FZD4Q9ULV1 537 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 ADAMTS5Q9UNA0 930 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 RCE1Q9Y256 329 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 REXO2Q9Y3B8 237 aaKnown RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 EPN1Q9Y6I3 576 aaPredicted RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 IKBKGQ9Y6K9 419 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 ZNF335Q9H4Z2 1342 aaPredicted RBP5.11□□□□□ -1.59
CD44-220ENST00000525688 ZFYVE9O95405 1425 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 SPHKAPQ2M3C7 1700 aa5.11□□□□□ -1.59
CD44-220ENST00000525688 PRAMEF2O60811 474 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 C1RP00736 705 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 TNNT1P13805 278 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 ENGP17813 658 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 MAKP20794 623 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 PNPLA4P41247 253 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 TNNT2P45379 298 aaPredicted RBP5.1□□□□□ -1.59
CD44-220ENST00000525688 IQGAP1P46940 1657 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 PCP4P48539 62 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 JAK3P52333 1124 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 CLTCL1P53675 1640 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 HSD17B7P56937 341 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 EEFSECP57772 596 aaKnown RBP5.1□□□□□ -1.59
CD44-220ENST00000525688 MRPS35P82673 323 aaKnown RBP5.1□□□□□ -1.59
CD44-220ENST00000525688 CDC16Q13042 620 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 SCARB2Q14108 478 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 RNASE12Q5GAN4 147 aaKnown RBP5.1□□□□□ -1.59
CD44-220ENST00000525688 CBWD5Q5RIA9 395 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 SPATA31A1Q5TZJ5 1347 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 TATDN1Q6P1N9 297 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 DENND1BQ6P3S1 775 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 ABRAXAS1Q6UWZ7 409 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 KRT74Q7RTS7 529 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 KDELC2Q7Z4H8 507 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 PEG10Q86TG7 708 aaKnown RBP5.1□□□□□ -1.59
CD44-220ENST00000525688 SLC44A3Q8N4M1 653 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 ANKRD52Q8NB46 1076 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 SH3RF3Q8TEJ3 882 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms