RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 IL1R2P27930 398 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SLC1A1P43005 524 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 NOP2P46087 812 aaKnown RBP17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 YBEYP58557 167 aaPredicted RBP17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SLC25A11Q02978 314 aaKnown RBP17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SLC20A2Q08357 652 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CAMK2GQ13555 558 aaPredicted RBP17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 DPYSL2Q16555 572 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CA9Q16790 459 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 RAD9BQ6WBX8 426 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 C11orf74Q86VG3 221 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 FRMD1Q8N878 549 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 MYO19Q96H55 970 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 KCTD15Q96SI1 283 aaPredicted RBP17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PSMB7Q99436 277 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ATP13A1Q9HD20 1204 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 DNAI1Q9UI46 699 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 HPCAL4Q9UM19 191 aa17■□□□□ 0.31
CSGALNACT1-216ENST00000524213 A0A0D9SEW6 157 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 TARSL2A2RTX5 802 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 NRDCO43847 1150 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ZNF217O75362 1048 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 HLA-EP13747 358 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 NDUFV2P19404 249 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 P2RY2P41231 377 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CTSOP43234 321 aaPredicted RBP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 GEMIN4P57678 1058 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 POLD3Q15054 466 aaPredicted RBP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SMTNL2Q2TAL5 461 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 HNRNPA1L2Q32P51 320 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PPP6R3Q5H9R7 873 aaPredicted RBP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 KCNT1Q5JUK3 1230 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 IL31Q6EBC2 164 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 RFX8Q6ZV50 586 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 TMEM139Q8IV31 216 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CCDC112Q8NEF3 446 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 OR7D4Q8NG98 312 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 OR2T3Q8NH03 318 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 HSPH1Q92598 858 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ARHGEF2Q92974 986 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 LOXL4Q96JB6 756 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SPON2Q9BUD6 331 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SLC6A17Q9H1V8 727 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ARRDC1-AS1Q9H2J1 176 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 VPS51Q9UID3 782 aa16.99■□□□□ 0.31
CSGALNACT1-216ENST00000524213 DOCK4Q8N1I0 1966 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 EDDM13A0A1B0GTR0 161 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 TMEM110-MUSTN1A8MSY1 372 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 EPN2O95208 641 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 GOT1P17174 413 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CLCN6P51797 869 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 KRT81Q14533 505 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ELF2Q15723 593 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CCDC6Q16204 474 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 MAP7D1Q3KQU3 841 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 DAB2IPQ5VWQ8 1189 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 METTL3Q86U44 580 aaKnown RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 MAP7D3Q8IWC1 876 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 LZTR1Q8N653 840 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ANP32BQ92688 251 aaKnown RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PRCCQ92733 491 aaPredicted RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SPACA7Q96KW9 195 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 RPL10LQ96L21 214 aaKnown RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ACE2Q9BYF1 805 aaPredicted RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PRSS16Q9NQE7 514 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 NDFIP2Q9NV92 336 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 RCOR3Q9P2K3 495 aaPredicted RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SLCO3A1Q9UIG8 710 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 MBD1Q9UIS9 605 aaPredicted RBP16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 HS3ST2Q9Y278 367 aa16.98■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ZSCAN5CA6NGD5 496 aaPredicted RBP16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 BTNL10A8MVZ5 291 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CBX4O00257 560 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ATP9BO43861 1147 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 RNASEH1O60930 286 aaKnown RBP16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 LRP3O75074 770 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 RHOBTB1O94844 696 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 TCF4P15884 667 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ERCC2P18074 760 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 VAV2P52735 878 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 NDST2P52849 883 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CDH6P55285 790 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PDK2Q15119 407 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PARP15Q460N3 678 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 ACCSLQ4AC99 568 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PMS2CLQ68D20 193 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 POLNQ7Z5Q5 900 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 KIAA1328Q86T90 577 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 TMPRSS6Q8IU80 811 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 UMODL1-AS1Q8N2C9 162 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SH2D3CQ8N5H7 860 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 SIPA1Q96FS4 1042 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 MRGPRX1Q96LB2 322 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CCDC114Q96M63 670 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PRDM16Q9HAZ2 1276 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 PCDH18Q9HCL0 1135 aa16.97■□□□□ 0.31
CSGALNACT1-216ENST00000524213 CD93Q9NPY3 652 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms