RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 MTA1Q13330 715 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 CAMK2BQ13554 666 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 SMAD1Q15797 465 aaKnown RBP19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 AGBL4Q5VU57 503 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 DSG4Q86SJ6 1040 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 SPATS2Q86XZ4 545 aaKnown RBP19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 ZDHHC17Q8IUH5 632 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 PIP4K2CQ8TBX8 421 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 PPP1R9BQ96SB3 815 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 TBCBQ99426 244 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 WDCPQ9H6R7 721 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 GDF3Q9NR23 364 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 GPSM3Q9Y4H4 160 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 FHOD1Q9Y613 1164 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 LAMA5O15230 3695 aa19.29■□□□□ 0.68
PTP4A3-206ENST00000524028 ITPR1Q14643 2758 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 PTPRBP23467 1997 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 K7ERQ8 282 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 RNF103O00237 685 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 SLC7A4O43246 635 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 BNIP3LO60238 219 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 SNAP91O60641 907 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 ITGAVP06756 1048 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 CTSLP07711 333 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 SRCP12931 536 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 PRKCSHP14314 528 aaPredicted RBP19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 GABRB2P47870 512 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 SULT1E1P49888 294 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 BPIFB4P59827 614 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 BNIP3Q12983 259 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 RAPGEF1Q13905 1077 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 INAVAQ3KP66 663 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 C2CD6Q53TS8 623 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 BRMS1LQ5PSV4 323 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 KLHDC7AQ5VTJ3 777 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 FAM46CQ5VWP2 391 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 NAPEPLDQ6IQ20 393 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 TRNP1Q6NT89 227 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 C19orf48Q6RUI8 117 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 DHRS13Q6UX07 377 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 XYLT1Q86Y38 959 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 GALNT15Q8N3T1 639 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 TMEM35BQ8NCS4 154 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 PGAP3Q96FM1 320 aaPredicted RBP19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 NAA15Q9BXJ9 866 aaKnown RBP19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 MUC3BQ9H195 1237 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 KDM4CQ9H3R0 1056 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 RRN3Q9NYV6 651 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 TPX2Q9ULW0 747 aaKnown RBP19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 HS3ST2Q9Y278 367 aa19.28■□□□□ 0.68
PTP4A3-206ENST00000524028 NYNRINQ9P2P1 1898 aaKnown RBP19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 TRABD2BA6NFA1 517 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 DRGXA6NNA5 263 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 ALOX15BO15296 676 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 EPHA8P29322 1005 aaPredicted RBP19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 TAS2R38P59533 333 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 DEUP1Q05D60 604 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 DNAJC3Q13217 504 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 TAF3Q5VWG9 929 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 PRPF39Q86UA1 669 aaKnown RBP19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 FAM114A1Q8IWE2 563 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 MFSD2AQ8NA29 543 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 C18orf8Q96DM3 657 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 VPS51Q9UID3 782 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 STAP1Q9ULZ2 295 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 CA5BQ9Y2D0 317 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 RAXQ9Y2V3 346 aa19.27■□□□□ 0.68
PTP4A3-206ENST00000524028 CACNA1GO43497 2377 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 A0A0D9SEW6 157 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 C1QTNF3-AMACRE9PGA6 284 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 ENC1O14682 589 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 SMAD6O43541 496 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 LDOC1O95751 146 aaPredicted RBP19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 RHOCP08134 193 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 ZNF18P17022 549 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 ERCC5P28715 1186 aaPredicted RBP19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 FLT3P36888 993 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 CLDN6P56747 220 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 SLC25A52Q3SY17 297 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 SLC45A4Q5BKX6 768 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 FAM102AQ5T9C2 384 aaPredicted RBP19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 KANSL1Q7Z3B3 1105 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 NOP9Q86U38 636 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 TRIM69Q86WT6 500 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 EID2Q8N6I1 236 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 ATP11CQ8NB49 1132 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 OR2A12Q8NGT7 310 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 CNDP2Q96KP4 475 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 C1orf74Q96LT6 269 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 PDCL3Q9H2J4 239 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 ERVMER34-1Q9H9K5 563 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 SAMSN1Q9NSI8 373 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 MPP6Q9NZW5 540 aa19.26■□□□□ 0.67
PTP4A3-206ENST00000524028 F9P00740 461 aa19.25■□□□□ 0.67
PTP4A3-206ENST00000524028 GLDCP23378 1020 aa19.25■□□□□ 0.67
PTP4A3-206ENST00000524028 RRM1P23921 792 aa19.25■□□□□ 0.67
PTP4A3-206ENST00000524028 SCNN1AP37088 669 aa19.25■□□□□ 0.67
PTP4A3-206ENST00000524028 RXRGP48443 463 aa19.25■□□□□ 0.67
PTP4A3-206ENST00000524028 ARRB1P49407 418 aaPredicted RBP19.25■□□□□ 0.67
PTP4A3-206ENST00000524028 KRT83P78385 493 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms