RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 FAM149B1Q96BN6 582 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 CCDC97Q96F63 343 aaPredicted RBP8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 SLC39A13Q96H72 371 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 BTN2A3PQ96KV6 586 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 PPP1R9BQ96SB3 815 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 DUSP23Q9BVJ7 150 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 CALN1Q9BXU9 219 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 FAM117AQ9C073 453 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 USP29Q9HBJ7 922 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 PREBQ9HCU5 417 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 ASCL3Q9NQ33 180 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 WDR70Q9NW82 654 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 NLGN3Q9NZ94 848 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 SLC12A6Q9UHW9 1150 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 XPO7Q9UIA9 1087 aaKnown RBP8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 SLC25A13Q9UJS0 675 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 RCOR1Q9UKL0 485 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 PPM1HQ9ULR3 514 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 SATB2Q9UPW6 733 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 NAALADL1Q9UQQ1 740 aa8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 HEMK1Q9Y5R4 338 aaPredicted RBP8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 TP53BP1Q12888 1972 aaPredicted RBP8.17□□□□□ -1.1
NSMCE2-213ENST00000523824 A0A1W2PQU0 124 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 CPED1A4D0V7 1026 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 COL6A6A6NMZ7 2263 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 K7ENP7 123 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 MCF2LO15068 1137 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 SCAMP1O15126 338 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ATP9BO43861 1147 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 PCDH8O95206 1070 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 F13A1P00488 732 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 FYNP06241 537 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 GIMD1P0DJR0 217 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 CMA1P23946 247 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 BRD2P25440 801 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 SYKP43405 635 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 PLK1P53350 603 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 HNRNPKP61978 463 aaKnown RBP eCLIP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 DLG2Q15700 870 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ISXQ2M1V0 245 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 EDRF1Q3B7T1 1238 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ZCWPW2Q504Y3 356 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ZNF542PQ5EBM4 170 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 SYPL2Q5VXT5 272 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 NEK5Q6P3R8 708 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 INO80CQ6PI98 192 aaPredicted RBP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 IGF2-ASQ6U949 168 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 TAC4Q86UU9 113 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 CCAR2Q8N163 923 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ATP6V0D2Q8N8Y2 350 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 TMEM145Q8NBT3 493 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ARID1BQ8NFD5 2236 aaPredicted RBP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 OR13H1Q8NG92 308 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 RNF34Q969K3 372 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 GRAMD1AQ96CP6 724 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 IFT43Q96FT9 208 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 SLC46A1Q96NT5 459 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 FZD3Q9NPG1 666 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 DYRK4Q9NR20 520 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ST7Q9NRC1 585 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 DNAJC28Q9NX36 388 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 COQ4Q9Y3A0 265 aa8.16□□□□□ -1.1
NSMCE2-213ENST00000523824 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 TCAF2A6NFQ2 919 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 KCNU1A8MYU2 1149 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 K7ESM1 405 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 RNF225M0QZC1 329 aaPredicted RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 KPNA3O00505 521 aaPredicted RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ALOX15BO15296 676 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 NEBLO76041 1014 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 CENPBP07199 599 aaPredicted RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 TGM2P21980 687 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 HNRNPA2B1P22626 353 aaKnown RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ACADSBP45954 432 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 CSRP3P50461 194 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 CLDN2P57739 230 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 TAS2R38P59533 333 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 DPYDQ12882 1025 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ZNF177Q13360 481 aaPredicted RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ZNF284Q2VY69 593 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ZSCAN23Q3MJ62 389 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 RABGAP1LQ5R372 815 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 PIP5KL1Q5T9C9 394 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 TTC39BQ5VTQ0 682 aaPredicted RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 Q6ZSR6 202 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 Q6ZVU0 165 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 PTAR1Q7Z6K3 402 aaPredicted RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 HORMAD1Q86X24 394 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 DCP2Q8IU60 420 aaKnown RBP8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ARL14Q8N4G2 192 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 UBR7Q8N806 425 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 TPCN2Q8NHX9 752 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 FAM174AQ8TBP5 190 aa8.15□□□□□ -1.1
NSMCE2-213ENST00000523824 ATXN7L3BQ96GX2 97 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms