RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 BCAT2O15382 392 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 CLDN3O15551 220 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 NDUFS2O75306 463 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 NCAM1P13591 858 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 FDPSP14324 419 aaKnown RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 TNFRSF1AP19438 455 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 ACAT1P24752 427 aaKnown RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 PSMA5P28066 241 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 CD6P30203 668 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 CSNK1EP49674 416 aaKnown RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 ZNF445P59923 1031 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 SLC7A9P82251 487 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 PDIA5Q14554 519 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 KCNB1Q14721 858 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 C10orf76Q5T2E6 689 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 DCAF12L1Q5VU92 463 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 LAYNQ6UX15 382 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 C1orf186Q6ZWK4 172 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 KCNK18Q7Z418 384 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 OSTM1Q86WC4 334 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 DCP1BQ8IZD4 617 aaKnown RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 THEM5Q8N1Q8 247 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 KIAA1958Q8N8K9 716 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 TERB1Q8NA31 727 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 UBXN4Q92575 508 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 FGF11Q92914 225 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 WBP2Q969T9 261 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 P2RY11Q96G91 374 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 ZNF274Q96GC6 653 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 TMEM176AQ96HP8 235 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 NTPCRQ9BSD7 190 aaKnown RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 GPR174Q9BXC1 333 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 SMPD4Q9NXE4 827 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 USP36Q9P275 1121 aaKnown RBP7.04□□□□□ -1.28
SDCBP-210ENST00000522843 CFAP97Q9P2B7 532 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 EFR3BQ9Y2G0 817 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 PMF1-BGLAPU3KQ54 211 aa7.04□□□□□ -1.28
SDCBP-210ENST00000522843 USP9YO00507 2555 aaPredicted RBP7.03□□□□□ -1.28
SDCBP-210ENST00000522843 ZNF840PA6NDX5 716 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 MEI4A8MW99 385 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.03□□□□□ -1.28
SDCBP-210ENST00000522843 E9PMD0 336 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 H0Y8X5 98 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 HOXC11O43248 304 aaPredicted RBP7.03□□□□□ -1.28
SDCBP-210ENST00000522843 PCDHGA12O60330 932 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 CYBBP04839 570 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 GSNP06396 782 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 JUPP14923 745 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 DDIT3P35638 169 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 KRT2P35908 639 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 TAF6P49848 677 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 RPL10AP62906 217 aaKnown RBP7.03□□□□□ -1.28
SDCBP-210ENST00000522843 IL9RQ01113 521 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 RHDQ02161 417 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 DNAJC3Q13217 504 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 ARHGAP40Q5TG30 622 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 HES3Q5TGS1 186 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 HLA-DQA1Q5Y7H0 255 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 RINT1Q6NUQ1 792 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 SLC39A4Q6P5W5 647 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 IL27RAQ6UWB1 636 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 KIAA1324Q6UXG2 1013 aaKnown RBP7.03□□□□□ -1.28
SDCBP-210ENST00000522843 TMEM25Q86YD3 366 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 PDCL2Q8N4E4 241 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 GP6Q9HCN6 339 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 ITM2CQ9NQX7 267 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 IL17BQ9UHF5 180 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 EIF2B4Q9UI10 523 aaKnown RBP7.03□□□□□ -1.28
SDCBP-210ENST00000522843 CPSF3Q9UKF6 684 aaKnown RBP7.03□□□□□ -1.28
SDCBP-210ENST00000522843 GTF3C4Q9UKN8 822 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 DSEQ9UL01 958 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 L1RE1Q9UN81 338 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 ZNF451Q9Y4E5 1061 aa7.03□□□□□ -1.28
SDCBP-210ENST00000522843 TLN1Q9Y490 2541 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 KPNA7A9QM74 516 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 PAPSS1O43252 624 aaPredicted RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 SUV39H1O43463 412 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 XPOTO43592 962 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 OAS1P00973 400 aaKnown RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 NTRK1P04629 796 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 DBHP09172 617 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 CD247P20963 164 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 MUTP22033 750 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 PAX3P23760 479 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 CDC25AP30304 524 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 ADSSP30520 456 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 MCM7P33993 719 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 GRK6P43250 576 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 ACADVLP49748 655 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 NEK4P51957 841 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 GAD2Q05329 585 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 CUL4AQ13619 759 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 SHBQ15464 509 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 NFE2Q16621 373 aaPredicted RBP7.02□□□□□ -1.29
SDCBP-210ENST00000522843 TBC1D25Q3MII6 688 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 FUT11Q495W5 492 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 CFAP221Q4G0U5 840 aa7.02□□□□□ -1.29
SDCBP-210ENST00000522843 PREPLQ4J6C6 727 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms