RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SLCO1B1Q9Y6L6 691 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 SCINQ9Y6U3 715 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 EDDM13A0A1B0GTR0 161 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 ILVBLA1L0T0 632 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 CBX4O00257 560 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 MID1O15344 667 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 ATP9BO43861 1147 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 CD160O95971 181 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 IGLV3-19P01714 112 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 CYP1A2P05177 515 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 C7P10643 843 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 MAOBP27338 520 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 L1CAMP32004 1257 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 ACSL1P33121 698 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 OXCT1P55809 520 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 SULT2A1Q06520 285 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 E2F5Q15329 346 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 DLG2Q15700 870 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 CSRP2Q16527 193 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 POM121L1PQ3SYA9 428 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 ACCSLQ4AC99 568 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 ZNF776Q68DI1 518 aaPredicted RBP18.29■□□□□ 0.52
CLK4-211ENST00000522556 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 METTL3Q86U44 580 aaKnown RBP18.29■□□□□ 0.52
CLK4-211ENST00000522556 C11orf74Q86VG3 221 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 VPS36Q86VN1 386 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 NETO2Q8NC67 525 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 FNIP1Q8TF40 1166 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 RMDN1Q96DB5 314 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 TRIM11Q96F44 468 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 KLC2Q9H0B6 622 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 ATP13A1Q9HD20 1204 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 TMEM51Q9NW97 253 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 SARDHQ9UL12 918 aa18.29■□□□□ 0.52
CLK4-211ENST00000522556 BNIP3LO60238 219 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 ACADMP11310 421 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 EPHB2P29323 1055 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 ZNF75DP51815 510 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 ZNF33AQ06730 810 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
CLK4-211ENST00000522556 BYSLQ13895 437 aaKnown RBP18.28■□□□□ 0.52
CLK4-211ENST00000522556 CST6Q15828 149 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 SMTNL2Q2TAL5 461 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 ACBD5Q5T8D3 534 aaPredicted RBP18.28■□□□□ 0.52
CLK4-211ENST00000522556 LYSMD4Q5XG99 296 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 AADATQ8N5Z0 425 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 TNKS2Q9H2K2 1166 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 PABPC3Q9H361 631 aaKnown RBP18.28■□□□□ 0.52
CLK4-211ENST00000522556 DHX35Q9H5Z1 703 aaKnown RBP18.28■□□□□ 0.52
CLK4-211ENST00000522556 ANAPC7Q9UJX3 599 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 HS3ST2Q9Y278 367 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 PCDHGA5Q9Y5G8 931 aa18.28■□□□□ 0.52
CLK4-211ENST00000522556 A0A1W2PP55 124 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 TARSL2A2RTX5 802 aaKnown RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 LRP3O75074 770 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 ZNF821O75541 412 aaPredicted RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 CTSLP07711 333 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 ZNF806P0C7X5 589 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 PI4KAP42356 2102 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 MAPKAPK2P49137 400 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 SLC18A3Q16572 532 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 KCNT1Q5JUK3 1230 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 SLC36A4Q6YBV0 504 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 RTL3Q8N8U3 475 aaKnown RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 TC2NQ8N9U0 490 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 ATP11CQ8NB49 1132 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 ARHGEF2Q92974 986 aaKnown RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 C2orf49Q9BVC5 232 aaPredicted RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 ACE2Q9BYF1 805 aaPredicted RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 C6orf106Q9H6K1 298 aaPredicted RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 MRPL47Q9HD33 250 aaKnown RBP18.27■□□□□ 0.52
CLK4-211ENST00000522556 MFHAS1Q9Y4C4 1052 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 PCDH15Q96QU1 1955 aa18.27■□□□□ 0.52
CLK4-211ENST00000522556 CEP250Q9BV73 2442 aa18.27■□□□□ 0.51
CLK4-211ENST00000522556 PLXNA2O75051 1894 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 DCHS1Q96JQ0 3298 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 LAMA1P25391 3075 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 SSU72P8A0A1W2PR75 194 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 NDUFS2O75306 463 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 DNTTP04053 509 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 GOT1P17174 413 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 VASPP50552 380 aaPredicted RBP18.26■□□□□ 0.51
CLK4-211ENST00000522556 TPI1P60174 286 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 KRT83P78385 493 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 IL31Q6EBC2 164 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 C22orf39Q6P5X5 142 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 ZNF783Q6ZMS7 281 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 CHST14Q8NCH0 376 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 HMCESQ96FZ2 354 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 EPAS1Q99814 870 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 NHEJ1Q9H9Q4 299 aaPredicted RBP18.26■□□□□ 0.51
CLK4-211ENST00000522556 FBRSQ9HAH7 460 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 PILRBQ9UKJ0 227 aa18.26■□□□□ 0.51
CLK4-211ENST00000522556 FCF1Q9Y324 198 aaKnown RBP18.26■□□□□ 0.51
CLK4-211ENST00000522556 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 AKR1B15C9JRZ8 316 aaPredicted RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 PRPSAP2O60256 369 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 RAMP2O60895 175 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 RNF8O76064 485 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 IL1BP01584 269 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms