RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ANO4Q32M45 955 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 EML3Q32P44 896 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 VITQ6UXI7 678 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 MFN1Q8IWA4 741 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 MFSD6LQ8IWD5 586 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 FAM71DQ8N9W8 422 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 CCNYQ8ND76 341 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 ARHGEF2Q92974 986 aaKnown RBP13.36□□□□□ -0.27
CPNE3-205ENST00000522240 ATP2A3Q93084 1043 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 HMCESQ96FZ2 354 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 P2RY11Q96G91 374 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 LRRC3BQ96PB8 259 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 VAT1Q99536 393 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 LGMNQ99538 433 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 FAM129AQ9BZQ8 928 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 DUS2Q9NX74 493 aaKnown RBP13.36□□□□□ -0.27
CPNE3-205ENST00000522240 PAK5Q9P286 719 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 ASIC3Q9UHC3 531 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 DMGDHQ9UI17 866 aaKnown RBP13.36□□□□□ -0.27
CPNE3-205ENST00000522240 IPO11Q9UI26 975 aaKnown RBP13.36□□□□□ -0.27
CPNE3-205ENST00000522240 PCDHGA10Q9Y5H3 936 aa13.36□□□□□ -0.27
CPNE3-205ENST00000522240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.35□□□□□ -0.27
CPNE3-205ENST00000522240 UQCRHLA0A096LP55 91 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 A0A0A0MRY4 1105 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 H3BQ06 376 aaPredicted RBP13.35□□□□□ -0.27
CPNE3-205ENST00000522240 MATN3O15232 486 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 OPHN1O60890 802 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 GCATO75600 419 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 ADH1CP00326 375 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 IFNB1P01574 187 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 CYP17A1P05093 508 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 UQCRHP07919 91 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 BMP1P13497 986 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 KCNA5P22460 613 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 ACTN2P35609 894 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 DRG2P55039 364 aaKnown RBP13.35□□□□□ -0.27
CPNE3-205ENST00000522240 IFI35P80217 286 aaPredicted RBP13.35□□□□□ -0.27
CPNE3-205ENST00000522240 IL10RBQ08334 325 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 AP1B1Q10567 949 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 DUPD1Q68J44 220 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 TANGO2Q6ICL3 276 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 WDR93Q6P2C0 686 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 TPGS1Q6ZTW0 290 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 TMEM25Q86YD3 366 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 ADGRG2Q8IZP9 1017 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 EIF1ADQ8N9N8 165 aaKnown RBP13.35□□□□□ -0.27
CPNE3-205ENST00000522240 DCAF4L2Q8NA75 395 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 NETO2Q8NC67 525 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 FIBINQ8TAL6 211 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 MAML1Q92585 1016 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 ASIC4Q96FT7 647 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 SPATA13Q96N96 652 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 ZNF599Q96NL3 588 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 BBS2Q9BXC9 721 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 C1QTNF1Q9BXJ1 281 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 SLC2A11Q9BYW1 496 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 SP110Q9HB58 689 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 NPDC1Q9NQX5 325 aaPredicted RBP13.35□□□□□ -0.27
CPNE3-205ENST00000522240 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 FAM114A2Q9NRY5 505 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 BRWD1Q9NSI6 2320 aa13.35□□□□□ -0.27
CPNE3-205ENST00000522240 CXorf51AA0A1B0GTR3 108 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 ZSCAN5CA6NGD5 496 aaPredicted RBP13.34□□□□□ -0.27
CPNE3-205ENST00000522240 ANHXE9PGG2 379 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 RNF103O00237 685 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 CACNG3O60359 315 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 PRAMEF11O60813 436 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 ADH5P11766 374 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 PSMC3P17980 439 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 PTPN3P26045 913 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 MRPS25P82663 173 aaKnown RBP13.34□□□□□ -0.27
CPNE3-205ENST00000522240 SLC7A5Q01650 507 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 GUCY2DQ02846 1103 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 GAD2Q05329 585 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 TNK2Q07912 1038 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 WASHC5Q12768 1159 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 CUL1Q13616 776 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 HTR4Q13639 388 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 DHCR24Q15392 516 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 SKIV2LQ15477 1246 aaKnown RBP13.34□□□□□ -0.27
CPNE3-205ENST00000522240 RNF219Q5W0B1 726 aaPredicted RBP13.34□□□□□ -0.27
CPNE3-205ENST00000522240 ARHGAP36Q6ZRI8 547 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 IFT20Q8IY31 132 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 CCDC33Q8N5R6 958 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPNE3-205ENST00000522240 GLIS1Q8NBF1 620 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 BBOF1Q8ND07 529 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 OR7D4Q8NG98 312 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 OR52K2Q8NGK3 314 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 WFDC5Q8TCV5 224 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 HLA-CQ95604 372 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 LRRC45Q96CN5 670 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 FAM83CQ9BQN1 747 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 ACE2Q9BYF1 805 aaPredicted RBP13.34□□□□□ -0.27
CPNE3-205ENST00000522240 MUC3BQ9H195 1237 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 C10orf88Q9H8K7 445 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms