RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 CDKL3Q8IVW4 592 aaPredicted RBP13.69□□□□□ -0.22
CLK4-210ENST00000522136 CPA6Q8N4T0 437 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 ALLCQ8N6M5 410 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 TSGA13Q96PP4 275 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 TRIM51Q9BSJ1 452 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 EPC1Q9H2F5 836 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 ATP13A1Q9HD20 1204 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 DNAJC17Q9NVM6 304 aaKnown RBP13.69□□□□□ -0.22
CLK4-210ENST00000522136 KIAA1522Q9P206 1035 aaPredicted RBP13.69□□□□□ -0.22
CLK4-210ENST00000522136 VPS28Q9UK41 221 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 COL4A3Q01955 1670 aa13.69□□□□□ -0.22
CLK4-210ENST00000522136 CBX4O00257 560 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 CACNG3O60359 315 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 ECEL1O95672 775 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 RHOXF2BP0C7M4 288 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 SOX9P48436 509 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 NAA30Q147X3 362 aaPredicted RBP13.68□□□□□ -0.22
CLK4-210ENST00000522136 HEATR6Q6AI08 1181 aaKnown RBP13.68□□□□□ -0.22
CLK4-210ENST00000522136 C8orf74Q6P047 294 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 ETFBKMTQ8IXQ9 262 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 CCDC13Q8IYE1 715 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 USP33Q8TEY7 942 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 HTR3CQ8WXA8 447 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 RHOXF2Q9BQY4 288 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 ACE2Q9BYF1 805 aaPredicted RBP13.68□□□□□ -0.22
CLK4-210ENST00000522136 FBXO10Q9UK96 956 aa13.68□□□□□ -0.22
CLK4-210ENST00000522136 TULP3O75386 442 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 PEX11BO96011 259 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 CISD3P0C7P0 127 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 CCNCP24863 283 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 GJA4P35212 333 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 VPS41P49754 854 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 CLCN6P51797 869 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 OXCT1P55809 520 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 WASHC5Q12768 1159 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 ZBTB17Q13105 803 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 NR1H3Q13133 447 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 LINGO4Q6UY18 593 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 JAMLQ86YT9 394 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 TAB3Q8N5C8 712 aaPredicted RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 CCDC26Q8TAB7 109 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 CHFRQ96EP1 664 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 ZNF419Q96HQ0 510 aaPredicted RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 XPO6Q96QU8 1125 aaKnown RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 BRD8Q9H0E9 1235 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 SP110Q9HB58 689 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 FAM50BQ9Y247 325 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 NEU2Q9Y3R4 380 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 EFCAB8A8MWE9 144 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 RNF103O00237 685 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 KDELR3O43731 214 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 PRAMEF11O60813 436 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 KRT14P02533 472 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 STIP1P31948 543 aaKnown RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 GEN1Q17RS7 908 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 PLEKHG6Q3KR16 790 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 ITPRIPL2Q3MIP1 535 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 FUT11Q495W5 492 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 PITRM1Q5JRX3 1037 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 ZNF783Q6ZMS7 281 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 MAATS1Q7Z4T9 603 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 LRRC49Q8IUZ0 686 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 CCDC110Q8TBZ0 833 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 SLC2A11Q9BYW1 496 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 TRIM31Q9BZY9 425 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 PDFQ9HBH1 243 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 IGSF9Q9P2J2 1179 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
CLK4-210ENST00000522136 VPS51Q9UID3 782 aa13.67□□□□□ -0.22
CLK4-210ENST00000522136 TCF20Q9UGU0 1960 aaKnown RBP13.66□□□□□ -0.22
CLK4-210ENST00000522136 LOC730098B7Z3J9 87 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
CLK4-210ENST00000522136 MATN3O15232 486 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 NARSO43776 548 aaKnown RBP13.66□□□□□ -0.22
CLK4-210ENST00000522136 ZMPSTE24O75844 475 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 JCHAINP01591 159 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 CCNB1P14635 433 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 PTPN3P26045 913 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 ETFBP38117 255 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 OPRD1P41143 372 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 CTSOP43234 321 aaPredicted RBP13.66□□□□□ -0.22
CLK4-210ENST00000522136 DGKGP49619 791 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 TERF1P54274 439 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 ARF5P84085 180 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 LMNB2Q03252 620 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 KDSRQ06136 332 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 IL10RBQ08334 325 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 PPP1R7Q15435 360 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 TMEM215Q68D42 235 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 SFTPA1Q8IWL2 248 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 CCDC89Q8N998 374 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 GRK7Q8WTQ7 553 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 SLCO2A1Q92959 643 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 RUNDC3BQ96NL0 473 aa13.66□□□□□ -0.22
CLK4-210ENST00000522136 THEGQ9P2T0 379 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms