RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 OTOAQ7RTW8 1153 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 CEP41Q9BYV8 373 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 TUBA8Q9NY65 449 aaPredicted RBP16.45■□□□□ 0.22
USP42-207ENST00000521713 TAS2R13Q9NYV9 303 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 RWDD3Q9Y3V2 267 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 PCDHGC5Q9Y5F6 944 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 CYP2A7P20853 494 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 C15orf59Q2T9L4 293 aaPredicted RBP16.45■□□□□ 0.22
USP42-207ENST00000521713 FOXR1Q6PIV2 292 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 FAM81AQ8TBF8 368 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 MAGEC3Q8TD91 643 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 BRI3BPQ8WY22 251 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 MFSD1Q9H3U5 465 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 MYRFQ9Y2G1 1151 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 ZNF862O60290 1169 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 MPOP05164 745 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 ELK3P41970 407 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 BRCC3P46736 316 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 ACOX1Q15067 660 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 SLC45A4Q5BKX6 768 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 RAD21L1Q9H4I0 556 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 COL20A1Q9P218 1284 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 ROBO1Q9Y6N7 1651 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 A0A087WXM4 84 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 MYO1GB0I1T2 1018 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 DYRK3O43781 588 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 SOAT1P35610 550 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 SMAD3P84022 425 aaKnown RBP16.44■□□□□ 0.22
USP42-207ENST00000521713 CHRNB3Q05901 458 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 GRTP1Q5TC63 336 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 GDPD5Q8WTR4 605 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 GLMNQ92990 594 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 PHF21AQ96BD5 680 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 PAIP1Q9H074 479 aaKnown RBP16.44■□□□□ 0.22
USP42-207ENST00000521713 FAM124BQ9H5Z6 455 aaPredicted RBP16.44■□□□□ 0.22
USP42-207ENST00000521713 UBAP1Q9NZ09 502 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 ZNF510Q9Y2H8 683 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 GJB6O95452 261 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 RPN2P04844 631 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 PRKCZQ05513 592 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 CSHL1Q14406 222 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 KCNMB4Q86W47 210 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 STK40Q8N2I9 435 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 ZCCHC7Q8N3Z6 543 aaKnown RBP16.44■□□□□ 0.22
USP42-207ENST00000521713 OSCP1Q8WVF1 389 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 COQ7Q99807 217 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 LTN1O94822 1766 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 IGLV3-22A0A075B6J6 115 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 OPLAHO14841 1288 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 FKBP9O95302 570 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 ARIH2O95376 493 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 EIF2S1P05198 315 aaKnown RBP16.44■□□□□ 0.22
USP42-207ENST00000521713 CYP3A5P20815 502 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 MATKP42679 507 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 NOMO3P69849 1222 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 MRPS5P82675 430 aaKnown RBP16.44■□□□□ 0.22
USP42-207ENST00000521713 FKBP9P1Q75LS8 142 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 TRMT11Q7Z4G4 463 aaKnown RBP16.44■□□□□ 0.22
USP42-207ENST00000521713 C11orf96Q7Z7L8 435 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 C19orf60Q96EN9 201 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 NDEL1Q9GZM8 345 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 DNPEPQ9ULA0 475 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 SORCS3Q9UPU3 1222 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 SLC27A5Q9Y2P5 690 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 TPH1P17752 444 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 CRABP2P29373 138 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 NAB1Q13506 487 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 SEL1L3Q68CR1 1132 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 HDDC2Q7Z4H3 204 aa16.44■□□□□ 0.22
USP42-207ENST00000521713 TLR5O60602 858 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 DGKIO75912 1065 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 CPA3P15088 417 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 RBL1P28749 1068 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 GLRBP48167 497 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 RAD23AP54725 363 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 FMO1Q01740 532 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 TBL3Q12788 808 aaKnown RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 CRHR2Q13324 411 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 BRMS1LQ5PSV4 323 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 SCARA3Q6AZY7 606 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 ACTR8Q9H981 624 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 MCM8Q9UJA3 840 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 TULP2O00295 520 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 ZNF23P17027 643 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 GSTT1P30711 240 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 NDUFV1P49821 464 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 ATXN3P54252 364 aaPredicted RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 POLNQ7Z5Q5 900 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 KYQ8NBH2 561 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 DLG3Q92796 817 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 HES6Q96HZ4 224 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 TMEM79Q9BSE2 394 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 NAALADL1Q9UQQ1 740 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 PNMA8CA0A1B0GUJ8 204 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 NCF1BA6NI72 391 aaPredicted RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 NCF1CA8MVU1 366 aaPredicted RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 C1QTNF3-AMACRE9PGA6 284 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 NCF1P14598 390 aaPredicted RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 AIF1P55008 147 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms