RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 PTK2Q05397 1052 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 ZNF177Q13360 481 aaPredicted RBP20.84■□□□□ 0.93
PABPC1-217ENST00000521067 INAVAQ3KP66 663 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 ALFQ53S48 1182 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 NAPEPLDQ6IQ20 393 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 Q6ZVU0 165 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 SLC26A9Q7LBE3 791 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 KANSL1Q7Z3B3 1105 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 PDZD3Q86UT5 571 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 ZNF683Q8IZ20 524 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 OR8D1Q8WZ84 308 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 PSMB7Q99436 277 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 SIK2Q9H0K1 926 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 PIGVQ9NUD9 493 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 DNAJC12Q9UKB3 198 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 CA5BQ9Y2D0 317 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 K7ERQ8 282 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 MCF2LO15068 1137 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 SNAP91O60641 907 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 CTSLP07711 333 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 TMPRSS12Q86WS5 348 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 SH2D3CQ8N5H7 860 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 PDCD7Q8N8D1 485 aaKnown RBP20.83■□□□□ 0.93
PABPC1-217ENST00000521067 MFSD2AQ8NA29 543 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 ZNF397Q8NF99 534 aaPredicted RBP20.83■□□□□ 0.93
PABPC1-217ENST00000521067 PIP4K2CQ8TBX8 421 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 TSC1Q92574 1164 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 NPY6RQ99463 290 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 KDM4CQ9H3R0 1056 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 ERVMER34-1Q9H9K5 563 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 TMPRSS4Q9NRS4 437 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 VPS28Q9UK41 221 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 PCDHGA1Q9Y5H4 931 aa20.83■□□□□ 0.93
PABPC1-217ENST00000521067 FAM170AA1A519 330 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 SLC7A4O43246 635 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 CLDN11O75508 207 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 SRCP12931 536 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 KRT9P35527 623 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 RNASE9P60153 205 aaKnown RBP20.82■□□□□ 0.92
PABPC1-217ENST00000521067 SOWAHCQ53LP3 525 aaPredicted RBP20.82■□□□□ 0.92
PABPC1-217ENST00000521067 SFMBT2Q5VUG0 894 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 FAM46CQ5VWP2 391 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 PRPF39Q86UA1 669 aaKnown RBP20.82■□□□□ 0.92
PABPC1-217ENST00000521067 FAM71AQ8IYT1 594 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 NT5C3BQ969T7 300 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 TKTL2Q9H0I9 626 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 CAAP1Q9H8G2 361 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 ARHGEF38Q9NXL2 777 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 SLC25A13Q9UJS0 675 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 TPX2Q9ULW0 747 aaKnown RBP20.82■□□□□ 0.92
PABPC1-217ENST00000521067 DOCK9Q9BZ29 2069 aa20.82■□□□□ 0.92
PABPC1-217ENST00000521067 SMAD6O43541 496 aaKnown RBP20.81■□□□□ 0.92
PABPC1-217ENST00000521067 BNIP3LO60238 219 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 MTIF2P46199 727 aaKnown RBP20.81■□□□□ 0.92
PABPC1-217ENST00000521067 CXCR3P49682 368 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 ACADVLP49748 655 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 CDH4P55283 916 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 DSG4Q86SJ6 1040 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 TRIM69Q86WT6 500 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 NOX5Q96PH1 765 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 HS3ST2Q9Y278 367 aa20.81■□□□□ 0.92
PABPC1-217ENST00000521067 A0A0D9SEW6 157 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 DRGXA6NNA5 263 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 ALOX15BO15296 676 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 ZNF18P17022 549 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 ARRB1P49407 418 aaPredicted RBP20.8■□□□□ 0.92
PABPC1-217ENST00000521067 SLC45A4Q5BKX6 768 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 MIIPQ5JXC2 388 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 PIP5KL1Q5T9C9 394 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 OR2A12Q8NGT7 310 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 CRELD1Q96HD1 420 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 LRIG1Q96JA1 1093 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 PPP1R9BQ96SB3 815 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 MUC3BQ9H195 1237 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 WDCPQ9H6R7 721 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 SCUBE2Q9NQ36 999 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.8■□□□□ 0.92
PABPC1-217ENST00000521067 VPS51Q9UID3 782 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 DMTF1Q9Y222 760 aa20.8■□□□□ 0.92
PABPC1-217ENST00000521067 COL5A1P20908 1838 aaPredicted RBP20.79■□□□□ 0.92
PABPC1-217ENST00000521067 YKT6O15498 198 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 RFPL3O75679 317 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 JUPP14923 745 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 RRM1P23921 792 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 KCNMA1Q12791 1236 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 MTA1Q13330 715 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 STAT4Q14765 748 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 C2CD6Q53TS8 623 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 TRNP1Q6NT89 227 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 IQCHQ86VS3 1027 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 CHST14Q8NCH0 376 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 KLK6Q92876 244 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 ARRDC3Q96B67 414 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 PGAP3Q96FM1 320 aaPredicted RBP20.79■□□□□ 0.92
PABPC1-217ENST00000521067 TBCBQ99426 244 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 SYNCQ9H7C4 482 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 MPP6Q9NZW5 540 aa20.79■□□□□ 0.92
PABPC1-217ENST00000521067 TP53BP1Q12888 1972 aaPredicted RBP20.79■□□□□ 0.92
PABPC1-217ENST00000521067 A0A087WV48 116 aa20.78■□□□□ 0.92
PABPC1-217ENST00000521067 C1QTNF3-AMACRE9PGA6 284 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms