RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ZNF662Q6ZS27 426 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 NUDT18Q6ZVK8 323 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 KIAA1328Q86T90 577 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 ADIPOR2Q86V24 386 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 TBC1D31Q96DN5 1066 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 KCTD15Q96SI1 283 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-222ENST00000520948 KCNF1Q9H3M0 494 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 DHX35Q9H5Z1 703 aaKnown RBP18.63■□□□□ 0.57
VEGFA-222ENST00000520948 ABCB8Q9NUT2 735 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 KIAA1522Q9P206 1035 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-222ENST00000520948 BCCIPQ9P287 314 aaKnown RBP eCLIP18.63■□□□□ 0.57
VEGFA-222ENST00000520948 GGA2Q9UJY4 613 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 RALYQ9UKM9 306 aaKnown RBP18.63■□□□□ 0.57
VEGFA-222ENST00000520948 ALG6Q9Y672 507 aa18.63■□□□□ 0.57
VEGFA-222ENST00000520948 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.62■□□□□ 0.57
VEGFA-222ENST00000520948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 TMEM110-MUSTN1A8MSY1 372 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 WASH4PA8MWX3 477 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 BUB1O43683 1085 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 PABPC1P11940 636 aaKnown RBP18.62■□□□□ 0.57
VEGFA-222ENST00000520948 SPINK2P20155 84 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 ZNF135P52742 658 aaPredicted RBP18.62■□□□□ 0.57
VEGFA-222ENST00000520948 KIF5AQ12840 1032 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 ZNF177Q13360 481 aaPredicted RBP18.62■□□□□ 0.57
VEGFA-222ENST00000520948 SLC12A1Q13621 1099 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 ANKS1BQ7Z6G8 1248 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 SETD3Q86TU7 594 aaPredicted RBP18.62■□□□□ 0.57
VEGFA-222ENST00000520948 TMEFF1Q8IYR6 380 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 TXLNBQ8N3L3 684 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 KCNV2Q8TDN2 545 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 WFIKKN2Q8TEU8 576 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 HMGB4Q8WW32 186 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 ZWILCHQ9H900 591 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 TMEM248Q9NWD8 314 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 ELOVL2Q9NXB9 296 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 OR51B4Q9Y5P0 310 aa18.62■□□□□ 0.57
VEGFA-222ENST00000520948 CFAP47Q6ZTR5 3102 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 CHD5Q8TDI0 1954 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 PLXND1Q9Y4D7 1925 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 ATXN2Q99700 1313 aaKnown RBP18.61■□□□□ 0.57
VEGFA-222ENST00000520948 C1QTNF9BB2RNN3 333 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 CDX4O14627 284 aaPredicted RBP18.61■□□□□ 0.57
VEGFA-222ENST00000520948 MAP3K13O43283 966 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 TIMM44O43615 452 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 CREB3O43889 395 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 ADAM23O75077 832 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 C1QTNF9P0C862 333 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 COMTP21964 271 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 P2RY2P41231 377 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 OXCT1P55809 520 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 CDH18Q13634 790 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 SMTNL2Q2TAL5 461 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 EOGTQ5NDL2 527 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 LRRC38Q5VT99 294 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 C11orf63Q6NUN7 778 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 LPCAT2Q7L5N7 544 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 POLNQ7Z5Q5 900 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 AHI1Q8N157 1196 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 PGBD3Q8N328 593 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 TSC1Q92574 1164 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 TTC17Q96AE7 1141 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 SPACA7Q96KW9 195 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 EPAS1Q99814 870 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 POLMQ9NP87 494 aaPredicted RBP18.61■□□□□ 0.57
VEGFA-222ENST00000520948 NDFIP2Q9NV92 336 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 CWC15Q9P013 229 aaKnown RBP18.61■□□□□ 0.57
VEGFA-222ENST00000520948 TRIM10Q9UDY6 481 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 MBD1Q9UIS9 605 aaPredicted RBP18.61■□□□□ 0.57
VEGFA-222ENST00000520948 CEP192Q8TEP8 1941 aa18.61■□□□□ 0.57
VEGFA-222ENST00000520948 FRYQ5TBA9 3013 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 TCRBV21S2A2A0A5A6 115 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 NRDCO43847 1150 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 TOP3BO95985 862 aaKnown RBP18.6■□□□□ 0.57
VEGFA-222ENST00000520948 KRT7P08729 469 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 IL4RP24394 825 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 MZF1P28698 734 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-222ENST00000520948 EPHB2P29323 1055 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 PTGER3P43115 390 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 MAPK8P45983 427 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 EIF4HQ15056 248 aaKnown RBP18.6■□□□□ 0.57
VEGFA-222ENST00000520948 PLEKHG6Q3KR16 790 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 FUT11Q495W5 492 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 TRIM61Q5EBN2 209 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 MBLAC2Q68D91 279 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 CCDC117Q8IWD4 279 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-222ENST00000520948 APCDD1Q8J025 514 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 LRRC57Q8N9N7 239 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 HSPH1Q92598 858 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 ZNF830Q96NB3 372 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-222ENST00000520948 FEM1AQ9BSK4 669 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 GOLPH3Q9H4A6 298 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 PCDH18Q9HCL0 1135 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 ADAMTS9Q9P2N4 1935 aa18.6■□□□□ 0.57
VEGFA-222ENST00000520948 ILVBLA1L0T0 632 aa18.59■□□□□ 0.57
VEGFA-222ENST00000520948 EEF2KO00418 725 aaKnown RBP18.59■□□□□ 0.57
VEGFA-222ENST00000520948 PROS1P07225 676 aa18.59■□□□□ 0.57
VEGFA-222ENST00000520948 CCDC175P0C221 793 aa18.59■□□□□ 0.57
VEGFA-222ENST00000520948 GOT1P17174 413 aa18.59■□□□□ 0.57
VEGFA-222ENST00000520948 CSKP41240 450 aa18.59■□□□□ 0.57
VEGFA-222ENST00000520948 SSR1P43307 286 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms