RNA–Protein interactions for RNA: ENST00000520866.5

NSMCE2-208, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 2 BASIC

Gene NSMCE2, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-208ENST00000520866 TRPC3Q13507 836 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 WDR72Q3MJ13 1102 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 KLHDC10Q6PID8 442 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 C19orf48Q6RUI8 117 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 KIAA1324Q6UXG2 1013 aaKnown RBP8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 DBX2Q6ZNG2 339 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 FRMD1Q8N878 549 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 NAT16Q8N8M0 369 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 NOC3LQ8WTT2 800 aaKnown RBP8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 SKA1Q96BD8 255 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 INTS4Q96HW7 963 aaKnown RBP8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 MAP6Q96JE9 813 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 SLC6A18Q96N87 628 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 NUP58Q9BVL2 599 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 FOXP3Q9BZS1 431 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 GAREM1Q9H706 876 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 PRDM16Q9HAZ2 1276 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 WSB2Q9NYS7 404 aaPredicted RBP8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 IL37Q9NZH6 218 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 USP36Q9P275 1121 aaKnown RBP8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 CGNQ9P2M7 1197 aaKnown RBP8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 ASPMQ8IZT6 3477 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 SPEGQ15772 3267 aa8.55□□□□□ -1.04
NSMCE2-208ENST00000520866 TNRC6BQ9UPQ9 1833 aaKnown RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 PTPRDP23468 1912 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 ADAMTS20P59510 1910 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 LAMA1P25391 3075 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 PCDH15Q96QU1 1955 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 ANK1P16157 1881 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 FRMD3A2A2Y4 597 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 NEDD8-MDP1E9PL57 170 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 EIF3DO15371 548 aaKnown RBP eCLIP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 RRP8O43159 456 aaKnown RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 TIMM44O43615 452 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 TLR5O60602 858 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 IGLV3-19P01714 112 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 ZDHHC11BP0C7U3 371 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 NCAM1P13591 858 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 HLA-EP13747 358 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 PDCP20941 246 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 SLC5A3P53794 718 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 AMPD3Q01432 767 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 IFRD2Q12894 506 aaPredicted RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 RABEP1Q15276 862 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 BBS9Q3SYG4 887 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 EGFLAMQ63HQ2 1017 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 SPOCD1Q6ZMY3 1216 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 TRAPPC11Q7Z392 1133 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 TMPRSS12Q86WS5 348 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 TMEM25Q86YD3 366 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 BBS7Q8IWZ6 715 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 RBBP8NLQ8NC74 664 aaPredicted RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 HNRNPLLQ8WVV9 542 aaKnown RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 PRCCQ92733 491 aaPredicted RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 NXPE2Q96DL1 559 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 SIPA1Q96FS4 1042 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 LRIG1Q96JA1 1093 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 TM9SF2Q99805 663 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 CBWD1Q9BRT8 395 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 MKRN2Q9H000 416 aaKnown RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 PNPLA8Q9NP80 782 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 ITM2CQ9NQX7 267 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 PANK4Q9NVE7 773 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 TBC1D7Q9P0N9 293 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 SUCOQ9UBS9 1254 aaKnown RBP8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 GPR160Q9UJ42 338 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 SLC27A6Q9Y2P4 619 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 PCDHGA1Q9Y5H4 931 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 ANAPC1Q9H1A4 1944 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 UBE4BO95155 1302 aa8.54□□□□□ -1.04
NSMCE2-208ENST00000520866 GOLGA8IPA6NC78 632 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 GOLGA8JA6NMD2 632 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 NOTOA8MTQ0 251 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 SCAMP3O14828 347 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 YKT6O15498 198 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 NRDCO43847 1150 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 PCDHGA12O60330 932 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 CYBBP04839 570 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 C1SP09871 688 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 STAT6P42226 847 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 CCT8P50990 548 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 CDH8P55286 799 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 ZNF445P59923 1031 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 ARID5AQ03989 594 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 ZBTB16Q05516 673 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 AUHQ13825 339 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 SF3A1Q15459 793 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 SMAD1Q15797 465 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 SNRNP35Q16560 246 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 ZNF394Q53GI3 561 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 LARP1BQ659C4 914 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 ZNF276Q8N554 614 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 DEFB119Q8N690 84 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 PNPLA1Q8N8W4 532 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 IGSF8Q969P0 613 aa8.53□□□□□ -1.04
NSMCE2-208ENST00000520866 DNAJC19Q96DA6 116 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms