RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 VPS4BO75351 444 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 SLU7O95391 586 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 TUBB4AP04350 444 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 TPM1P09493 284 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CCDC175P0C221 793 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 NPPBP16860 134 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 GLDCP23378 1020 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 PTDSS1P48651 473 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 RAC3P60763 192 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 SETQ01105 290 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CAP1Q01518 475 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 SATB1Q01826 763 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 SPP2Q13103 211 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 ITGB3BPQ13352 177 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CTTNQ14247 550 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 PLA1AQ53H76 456 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 FAXCQ5TGI0 409 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CACHD1Q5VU97 1274 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 LRCH2Q5VUJ6 765 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 PLAG1Q6DJT9 500 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 MRNIPQ6NTE8 343 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 EFCAB12Q6NXP0 572 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 MOGAT3Q86VF5 341 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 KRT73Q86Y46 540 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 TMTC1Q8IUR5 882 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CREBRFQ8IUR6 639 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CCDC28AQ8IWP9 274 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 COLGALT2Q8IYK4 626 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 SCYL3Q8IZE3 742 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 BORCS6Q96GS4 357 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 ERO1AQ96HE7 468 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 C12orf42Q96LP6 360 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 ZNF512Q96ME7 567 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 FIZ1Q96SL8 496 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 NELL2Q99435 816 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CHP1Q99653 195 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 TSG101Q99816 390 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 HSD17B14Q9BPX1 270 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 MXRA8Q9BRK3 442 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 LSM14BQ9BX40 385 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 NDST4Q9H3R1 872 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 RPAP3Q9H6T3 665 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 SPON1Q9HCB6 807 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 RAVER2Q9HCJ3 691 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 TUFT1Q9NNX1 390 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 SAYSD1Q9NPB0 183 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 AGPAT5Q9NUQ2 364 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 MRPS18AQ9NVS2 196 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 GGA3Q9NZ52 723 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 FAM30AQ9NZY2 134 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 KIF17Q9P2E2 1029 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 IFT80Q9P2H3 777 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CNOT7Q9UIV1 285 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 CNOT6Q9ULM6 557 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 ZMYND8Q9ULU4 1186 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 FZD1Q9UP38 647 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 MTO1Q9Y2Z2 717 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 UBIAD1Q9Y5Z9 338 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 HS3ST4Q9Y661 456 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 V9GYY5 206 aaPredicted RBP5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 ASTN1O14525 1302 aa5.13□□□□□ -1.59
CTNNA1-212ENST00000518919 LOC285556D6RIA3 1793 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 PARP14Q460N5 1801 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 HMX3A6NHT5 357 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 AQP7P3A6NL99 342 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 MATN2O00339 956 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 RRP9O43818 475 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 TBCAO75347 108 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 FLOT1O75955 427 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 ACTL6BO94805 426 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 SLITRK3O94933 977 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 NDUFA10O95299 355 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 POLBP06746 335 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 PECAM1P16284 738 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 CHRM3P20309 590 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 ATICP31939 592 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 HNRNPH3P31942 346 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 PAPOLAP51003 745 aaKnown RBP5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 ZNF131P52739 623 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 POLE2P56282 527 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 GNG11P61952 73 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 ZBED6P86452 979 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 KRT17Q04695 432 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 PIGFQ07326 219 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 NSUN2Q08J23 767 aaKnown RBP eCLIP5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 TCF15Q12870 199 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 MAPK7Q13164 816 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 SLC5A9Q2M3M2 681 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 EDRF1Q3B7T1 1238 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 HERC4Q5GLZ8 1057 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 TMTC4Q5T4D3 741 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 RAP1GAP2Q684P5 730 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 FCRL6Q6DN72 434 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 RINT1Q6NUQ1 792 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 DPY19L2P1Q6NXN4 242 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 PDXDC1Q6P996 788 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 FAM111BQ6SJ93 734 aa5.12□□□□□ -1.59
CTNNA1-212ENST00000518919 KIAA0408Q6ZU52 694 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms