RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TSPAN3O60637 253 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 LDHAP00338 332 aaKnown RBP6.31□□□□□ -1.4
PABPC1-207ENST00000518716 KRT19P08727 400 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 CDK4P11802 303 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 ZNF16P17020 682 aaPredicted RBP6.31□□□□□ -1.4
PABPC1-207ENST00000518716 BMP7P18075 431 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 ACADVLP49748 655 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 MFAP3P55082 362 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 CLDN6P56747 220 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 NFKB2Q00653 900 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
PABPC1-207ENST00000518716 TARDBPQ13148 414 aaKnown RBP eCLIP6.31□□□□□ -1.4
PABPC1-207ENST00000518716 GEN1Q17RS7 908 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 TMEM215Q68D42 235 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 ALG1LQ6GMV1 187 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 KLHDC10Q6PID8 442 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 KIAA1324Q6UXG2 1013 aaKnown RBP6.31□□□□□ -1.4
PABPC1-207ENST00000518716 SFR1Q86XK3 245 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 EGFL6Q8IUX8 553 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 B3GALNT2Q8NCR0 500 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 EPS8L3Q8TE67 593 aaKnown RBP6.31□□□□□ -1.4
PABPC1-207ENST00000518716 SAP25Q8TEE9 199 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 SCFD1Q8WVM8 642 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 FGF11Q92914 225 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 FBXO32Q969P5 355 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 SIPA1Q96FS4 1042 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 HIC2Q96JB3 615 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 XPO6Q96QU8 1125 aaKnown RBP6.31□□□□□ -1.4
PABPC1-207ENST00000518716 BBS2Q9BXC9 721 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 FGFBP2Q9BYJ0 223 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 SEMA4CQ9C0C4 833 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 XYLT2Q9H1B5 865 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 MIR1-1HGQ9H1L0 117 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 TM9SF3Q9HD45 589 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 SEL1LQ9UBV2 794 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 CLEC4EQ9ULY5 219 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 FLNCQ14315 2725 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 RELNP78509 3460 aa6.31□□□□□ -1.4
PABPC1-207ENST00000518716 COL12A1Q99715 3063 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 A0A1B0GTQ1 180 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 GOLGA8IPA6NC78 632 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 GOLGA8JA6NMD2 632 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CAPN9O14815 690 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 RRP8O43159 456 aaKnown RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 ARHGAP6O43182 974 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 DFNA5O60443 496 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TLR5O60602 858 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TBCAO75347 108 aaKnown RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 BEST1O76090 585 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 KLKB1P03952 638 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 JUPP14923 745 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 PRKCHP24723 683 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CD27P26842 260 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 ACSL1P33121 698 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 HOXD13P35453 343 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CCT8P50990 548 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CLCN7P51798 805 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 SLC5A3P53794 718 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 SEMG2Q02383 582 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CAMK2GQ13555 558 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 DHX8Q14562 1220 aaKnown RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TBC1D25Q3MII6 688 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TPGS1Q6ZTW0 290 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TRAPPC11Q7Z392 1133 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 KANSL1Q7Z3B3 1105 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 NOP9Q86U38 636 aaKnown RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CBWD2Q8IUF1 395 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 FUKQ8N0W3 1084 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 ZNF276Q8N554 614 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 DCBLD1Q8N8Z6 715 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 LARP4BQ92615 738 aaKnown RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CCDC74AQ96AQ1 378 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 BIRC7Q96CA5 298 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TMEM176AQ96HP8 235 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 KCNC2Q96PR1 638 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 ACCSQ96QU6 501 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 SMOQ99835 787 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TMEM245Q9H330 911 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 ZHX3Q9H4I2 956 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CLMPQ9H6B4 373 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 CSNK1G1Q9HCP0 422 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 NPHS2Q9NP85 383 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 OLFML3Q9NRN5 406 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 ELOVL2Q9NXB9 296 aa6.3□□□□□ -1.4
PABPC1-207ENST00000518716 UBR5O95071 2799 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 USP9YO00507 2555 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-207ENST00000518716 TEX15Q9BXT5 2789 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 HHLA1C9JL84 531 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 CBX4O00257 560 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 ENC1O14682 589 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 KIAA0391O15091 583 aaKnown RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 VILLO15195 856 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 BRINP1O60477 761 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 PEX14O75381 377 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 RFPL3O75679 317 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 WNT1P04628 370 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms