RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CLDND1Q9NY35 253 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 LRFN1Q9P244 771 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 EIF2B4Q9UI10 523 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 ITGA11Q9UKX5 1188 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 BLOC1S6Q9UL45 172 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TRAF3IP3Q9Y228 551 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SSX2IPQ9Y2D8 614 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 C2CD2Q9Y426 696 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TIMM13Q9Y5L4 95 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 ST14Q9Y5Y6 855 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 LRRIQ3A6PVS8 624 aaPredicted RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 KPNA7A9QM74 516 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 H3BML4 177 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 H7C4K7 107 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CYB561D2O14569 222 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 AURKAO14965 403 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 LINC01565O15544 149 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 STX10O60499 249 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 HUS1O60921 280 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CLASP2O75122 1294 aaKnown RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 FGFR1OPO95684 399 aaKnown RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 CBX7O95931 251 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CNPP09543 421 aaKnown RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 FAM87AP0C7U9 286 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 TRIM49P0CI25 452 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 TRIM49CP0CI26 452 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 SRGAP2BP0DMP2 458 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 SRFP11831 508 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 ODC1P11926 461 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 OSMP13725 252 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 ATP6V1B1P15313 513 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 ITIH2P19823 946 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 KCNA5P22460 613 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CCNE1P24864 410 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 TKTP29401 623 aaKnown RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 LRPAP1P30533 357 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 OR1D2P34982 312 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 PNPLA4P41247 253 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 GCLMP48507 274 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 NDUFV1P49821 464 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 TAF6P49848 677 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CDR1P51861 262 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 LILRA4P59901 499 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 DLG4P78352 724 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 GUCY1A3Q02108 690 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CREMQ03060 361 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 LRRC63Q05C16 580 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 TNK2Q07912 1038 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 HYAL1Q12794 435 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 PMS2P11Q13670 270 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 SLMAPQ14BN4 828 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 PFKFB4Q16877 469 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 UVSSAQ2YD98 709 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 EDRF1Q3B7T1 1238 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 ARL13BQ3SXY8 428 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CTXN3Q4LDR2 81 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 RTP2Q5QGT7 225 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 ARMC4Q5T2S8 1044 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 SFRP5Q5T4F7 317 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CENPPQ6IPU0 288 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 PRSS55Q6UWB4 352 aaPredicted RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 RFX8Q6ZV50 586 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 INTS8Q75QN2 995 aaKnown RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 TRAPPC11Q7Z392 1133 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 KDELC2Q7Z4H8 507 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 LRRTM4Q86VH4 590 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 METTL23Q86XA0 190 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CILP2Q8IUL8 1156 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 WDR49Q8IV35 697 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CPOQ8IVL8 374 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 THEM5Q8N1Q8 247 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 OR5B17Q8NGF7 314 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 LRTOMTQ8WZ04 291 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 UTP4Q969X6 686 aaKnown RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 HPDLQ96IR7 371 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 HIC2Q96JB3 615 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 MAELQ96JY0 434 aaKnown RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 SENP8Q96LD8 212 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 KLHL5Q96PQ7 755 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 HERC2P3Q9BVR0 1158 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 YIPF2Q9BWQ6 316 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 SLC12A9Q9BXP2 914 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 HDAC8Q9BY41 377 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 ZBP1Q9H171 429 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 DUSP15Q9H1R2 295 aaPredicted RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 TSPY26PQ9H489 355 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 GRPEL1Q9HAV7 217 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 INTS13Q9NVM9 706 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 RABL2AQ9UBK7 228 aaPredicted RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 ARMCX3Q9UH62 379 aaPredicted RBP2.9□□□□□ -1.95
SKP1-204ENST00000517691 RWDD2AQ9UIY3 292 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 TUBD1Q9UJT1 453 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 SNX13Q9Y5W8 968 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 SNX9Q9Y5X1 595 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 PTPRJQ12913 1337 aa2.9□□□□□ -1.95
SKP1-204ENST00000517691 CHD7Q9P2D1 2997 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 A0A087X0M5 115 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 A0A1B0GX30 115 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 ARHGEF37A1IGU5 675 aa2.89□□□□□ -1.95
SKP1-204ENST00000517691 HMX2A2RU54 273 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms