RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 HMCESQ96FZ2 354 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C16orf45Q96MC5 204 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZNF599Q96NL3 588 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IER2Q9BTL4 223 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C1QTNF1Q9BXJ1 281 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FRMD8P1Q9BZ68 369 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MAGEB5Q9BZ81 275 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FOXQ1Q9C009 403 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SLC39A8Q9C0K1 460 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DYRK4Q9NR20 520 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KCND1Q9NSA2 647 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SPATA6Q9NWH7 488 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FEZ2Q9UHY8 353 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IPO11Q9UI26 975 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FBXO10Q9UK96 956 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ERVW-1Q9UQF0 538 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NCKAP1Q9Y2A7 1128 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TTLL3Q9Y4R7 772 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SAR1BQ9Y6B6 198 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TCF20Q9UGU0 1960 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 BRWD1Q9NSI6 2320 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 A0A0A0MRY4 1105 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 A0A0D9SEW6 157 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EDDM13A0A1B0GTR0 161 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TARSL2A2RTX5 802 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GOLGA6CA6NDK9 693 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GOLGA6BA6NDN3 693 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 USP27XA6NNY8 438 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HACD1B0YJ81 288 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PRRT4C9JH25 899 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C1QTNF3-AMACRE9PGA6 284 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 I6L893 689 aaPredicted RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 APOC4-APOC2K7ER74 178 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PGRMC1O00264 195 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GFRA2O00451 464 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KRIT1O00522 736 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DCLK1O15075 740 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TRIM24O15164 1050 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MATN3O15232 486 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DDX3YO15523 660 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SNAP91O60641 907 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PRAMEF11O60813 436 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 URI1O94763 535 aaPredicted RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SLC34A2O95436 690 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IGSF6O95976 241 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 APOC2P02655 101 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FGGP02679 453 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DNTTP04053 509 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ATP1A1P05023 1023 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DCNP07585 359 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GOLGA6DP0CG33 693 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HOXB2P14652 356 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HNRNPLP14866 589 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CES1P23141 567 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCNCP24863 283 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NFKBIAP25963 317 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TARSP26639 723 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CXCR5P32302 372 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PTPN7P35236 360 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ACVRL1P37023 503 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HSPA9P38646 679 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MAPK8P45983 427 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RPS9P46781 194 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CXCL12P48061 93 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LMAN1P49257 510 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PEX5P50542 639 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IRAK1P51617 712 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCR3P51677 355 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ARSEP51690 589 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DGKEP52429 567 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EIF3EP60228 445 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ETF1P62495 437 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CKAP4Q07065 602 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 BYSLQ13895 437 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PRPSAP1Q14558 356 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZNF234Q14588 700 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LBRQ14739 615 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DLG2Q15700 870 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FUT11Q495W5 492 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TMEM31Q5JXX7 168 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FAM46CQ5VWP2 391 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NCBP2-AS2Q69YL0 99 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HEATR6Q6AI08 1181 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SLC9A4Q6AI14 798 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCDC70Q6NSX1 233 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LINGO4Q6UY18 593 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SYT10Q6XYQ8 523 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LEKR1Q6ZMV7 388 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 BBS12Q6ZW61 710 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CYP4V2Q6ZWL3 525 aaPredicted RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ADIPOR2Q86V24 386 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZC3H18Q86VM9 953 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NLRP14Q86W24 1093 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SLC13A5Q86YT5 568 aaPredicted RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCDC13Q8IYE1 715 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZNF683Q8IZ20 524 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NDUFAF2Q8N183 169 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C17orf53Q8N3J3 647 aaPredicted RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SPEM1Q8N4L4 309 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FBXL6Q8N531 539 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 753.4 ms