RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 LMO2P25791 158 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MZF1P28698 734 aaPredicted RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 POLR2BP30876 1174 aaKnown RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CORO1AP31146 461 aaKnown RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MAN1A1P33908 653 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 DLSTP36957 453 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 STAT5AP42229 794 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 LIG4P49917 911 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CCL11P51671 97 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 SLC5A3P53794 718 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RCAN1P53805 252 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CACNA2D1P54289 1103 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 PPP2R2BQ00005 443 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 FOXM1Q08050 763 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 PDE1CQ14123 709 aaPredicted RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CALCRLQ16602 461 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 KMT5BQ4FZB7 885 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 C9orf64Q5T6V5 341 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ANKS6Q68DC2 871 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 KYAT3Q6YP21 454 aaKnown RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 PIM3Q86V86 326 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 SKAP1Q86WV1 359 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 FAM129CQ86XR2 697 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ZC3H3Q8IXZ2 948 aaKnown RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RBFAQ8N0V3 343 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 STK40Q8N2I9 435 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ZNF808Q8N4W9 903 aaPredicted RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 TOP6BLQ8N6T0 577 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RBMXL3Q8N7X1 1067 aaKnown RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 AGBL5Q8NDL9 886 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 PCDH19Q8TAB3 1148 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 TMEM158Q8WZ71 300 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CGRRF1Q99675 332 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 LRRC61Q9BV99 259 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 SLC26A6Q9BXS9 759 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 SLC13A1Q9BZW2 595 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ZNF518BQ9C0D4 1074 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RDH14Q9HBH5 336 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 TLR8Q9NR97 1041 aaKnown RBP5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 TMEM30AQ9NV96 361 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ADAM21Q9UKJ8 722 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RPS6KL1Q9Y6S9 549 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MEGF8Q7Z7M0 2845 aa5.85□□□□□ -1.47
SCARNA21.2-201ENST00000516600 NBEAL2Q6ZNJ1 2754 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ZGRF1Q86YA3 2104 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 PIPSLA2A3N6 862 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 M0QYT0 321 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 M0R2N6 131 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 TULP1O00294 542 aaPredicted RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 HNRNPDLO14979 420 aaKnown RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MDM4O15151 490 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 FAM189A1O60320 539 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MED24O75448 989 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 KATNA1O75449 491 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CPNE6O95741 557 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 KLKB1P03952 638 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 STSP08842 583 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 PTPN1P18031 435 aaKnown RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 HOXD9P28356 352 aaPredicted RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ELAVL3Q14576 367 aaKnown RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CEBPEQ15744 281 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ZNF284Q2VY69 593 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MPPE1Q53F39 396 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 C10orf120Q5SQS8 335 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 C20orf194Q5TEA3 1177 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 AGBL4Q5VU57 503 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CPZQ66K79 652 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 SPRED1Q7Z699 444 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 HORMAD1Q86X24 394 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 PHACTR4Q8IZ21 702 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ESX1Q8N693 406 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RUFY2Q8WXA3 655 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 FAM131CQ96AQ9 280 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MYO19Q96H55 970 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CCDC74BQ96LY2 380 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 FAM129BQ96TA1 746 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 LARP6Q9BRS8 491 aaKnown RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 ANP32EQ9BTT0 268 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 MSTO1Q9BUK6 570 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RNF26Q9BY78 433 aaPredicted RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 BHMT2Q9H2M3 363 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 GPR27Q9NS67 375 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CCM2LQ9NUG4 571 aaPredicted RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 GDAP2Q9NXN4 497 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 CPSF3Q9UKF6 684 aaKnown RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 APPL1Q9UKG1 709 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 GPR34Q9UPC5 381 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 AGAP1Q9UPQ3 857 aa5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 RBM8AQ9Y5S9 174 aaKnown RBP5.84□□□□□ -1.47
SCARNA21.2-201ENST00000516600 AKAP6Q13023 2319 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 FER1L5A0AVI2 2057 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 IGHV5-10-1A0A0J9YXX1 117 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 POM121BA6NF01 834 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 SFI1A8K8P3 1242 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 TTC34A8MYJ7 566 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 B4E171 279 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 HIP1RO75146 1068 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 STK17BO94768 372 aa5.83□□□□□ -1.48
SCARNA21.2-201ENST00000516600 MAP3K6O95382 1288 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms