RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 HNRNPCL1O60812 293 aaKnown RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 CLDN14O95500 239 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 ASLP04424 464 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 ITGA2BP08514 1039 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 GNAI3P08754 354 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 LINC00271P0C7V0 271 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 JMJD7P0C870 316 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 HNRNPCL4P0DMR1 293 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 CEACAM1P13688 526 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 FOLR2P14207 255 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 HGFP14210 728 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 AKR1A1P14550 325 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 HOXC8P31273 242 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 CYP2C19P33261 490 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 MAP2K2P36507 400 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 PPP3CCP48454 512 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 CPT1AP50416 773 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 BMXP51813 675 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 KPNA1P52294 538 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 TIRAPP58753 221 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 GNAI1P63096 354 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 MEF2BQ02080 365 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 SSRP1Q08945 709 aaKnown RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 FUT7Q11130 342 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 EFNB3Q15768 340 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 ADAMTSL4-AS1Q5T5F5 129 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 BHLHB9Q6PI77 547 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 FBXO46Q6PJ61 603 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 TRIM65Q6PJ69 517 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 NEK10Q6ZWH5 1172 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 NOP9Q86U38 636 aaKnown RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 RASSF3Q86WH2 238 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 SFR1Q86XK3 245 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 CAMK1DQ8IU85 385 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 METTL27Q8N6F8 245 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 SSC4DQ8WTU2 575 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 STAMQ92783 540 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 BCANQ96GW7 911 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 PUS7Q96PZ0 661 aaKnown RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 LRRC61Q9BV99 259 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 PUS3Q9BZE2 481 aaKnown RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 QRSL1Q9H0R6 528 aaKnown RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 PNRC2Q9NPJ4 139 aaKnown RBP-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 KLHL1Q9NR64 748 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 SMARCAL1Q9NZC9 954 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 PCDHA13Q9Y5I0 950 aa-0.58□□□□□ -2.5
RNU6-542P-201ENST00000516405 IGLV7-46A0A075B6I9 117 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 A0A087WWL8 130 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 HAT1O14929 419 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 KCNN4O15554 427 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 OPA1O60313 960 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 GAS7O60861 476 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 RAB11FIP3O75154 756 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 NEURL1O76050 574 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 LY6G6DO95868 133 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 SSBP05455 408 aaKnown RBP eCLIP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 IGHV4-30-4P0DP06 118 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 LRPAP1P30533 357 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 SOX5P35711 763 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 AGFG1P52594 562 aaKnown RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 ERVK-21P61565 698 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 CCDC15Q0P6D6 951 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 SNAPC2Q13487 334 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 OLIG2Q13516 323 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 EBI3Q14213 229 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 CTTNQ14247 550 aaKnown RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 MYBPC2Q14324 1141 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 CALCRLQ16602 461 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 FAM69BQ5VUD6 431 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 Q6P435 159 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 TFAP2EQ6VUC0 442 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 ZNF534Q76KX8 674 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 METTL16Q86W50 562 aaKnown RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 YAF2Q8IY57 180 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 METTL25Q8N6Q8 603 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 STPG4Q8N801 248 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 C17orf47Q8NEP4 570 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 PPHLN1Q8NEY8 458 aaKnown RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 BICD2Q8TD16 824 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 ZCCHC13Q8WW36 166 aaKnown RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 FCAMRQ8WWV6 532 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 ZNF419Q96HQ0 510 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 VN1R3Q9BXE9 311 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 KLHL31Q9H511 634 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 TOPORSQ9NS56 1045 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 ZNF581Q9P0T4 197 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 NKX1-2Q9UD57 310 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 INTUQ9ULD6 942 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 STXBP5LQ9Y2K9 1186 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 SLC45A1Q9Y2W3 748 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 PLEKHM1Q9Y4G2 1056 aa-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 DSTQ03001 7570 aaKnown RBP-0.59□□□□□ -2.5
RNU6-542P-201ENST00000516405 A0A087WUV0 522 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 EXOC5O00471 708 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 KLF4O43474 513 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ITM2AO43736 263 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 WISP3O95389 354 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 DUS4LO95620 317 aaKnown RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 TFRCP02786 760 aaKnown RBP-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms