RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 RMI1Q9H9A7 625 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 NCKIPSDQ9NZQ3 722 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 HERC5Q9UII4 1024 aaKnown RBP4.28□□□□□ -1.72
LINC01088-211ENST00000515597 PCDHGB1Q9Y5G3 927 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 CCDC194A0A1B0GVG4 234 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 AGAP5A6NIR3 686 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 RGS14O43566 566 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 SKAP2O75563 359 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 ZNF432O94892 652 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 HEXIM1O94992 359 aaKnown RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 HOXC6P09630 235 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 GYS1P13807 737 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 ARSBP15848 533 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 HOXB9P17482 250 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 SERPINB3P29508 390 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 COMPP49747 757 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 POLE2P56282 527 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 CRYZQ08257 329 aaKnown RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 GALNT1Q10472 559 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 TRAF1Q13077 416 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 BRD3Q15059 726 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 PFKFB4Q16877 469 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 ZACNQ401N2 412 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 PLK5Q496M5 336 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 PGBD2Q6P3X8 592 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 SLC30A9Q6PML9 568 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 GSG1LQ6UXU4 331 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 SLC16A12Q6ZSM3 486 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 RAB11FIP2Q7L804 512 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 ANKS1BQ7Z6G8 1248 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 IGFN1Q86VF2 1251 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 SLC44A2Q8IWA5 706 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 ENGASEQ8NFI3 743 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 GABPB2Q8TAK5 448 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 WDR77Q9BQA1 342 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 C6orf106Q9H6K1 298 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-211ENST00000515597 PDE11AQ9HCR9 933 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 PRDM8Q9NQV8 689 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 SLC22A11Q9NSA0 550 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 ARL15Q9NXU5 204 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 DAPP1Q9UN19 280 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 PCDHA10Q9Y5I2 948 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 SLC4A4Q9Y6R1 1079 aa4.27□□□□□ -1.73
LINC01088-211ENST00000515597 CLEC18AA5D8T8 446 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 ACTL6BO94805 426 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 CYP1A2P05177 515 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 SETSIPP0DME0 302 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 PRPH2P23942 346 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 PDIA3P30101 505 aaKnown RBP4.26□□□□□ -1.73
LINC01088-211ENST00000515597 TNFSF8P32971 234 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 SERPINF1P36955 418 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 HTR3AP46098 478 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 RFX5P48382 616 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-211ENST00000515597 PCP4P48539 62 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 PDLIM4P50479 330 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 OAZ1P54368 228 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 TNFAIP2Q03169 654 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 GPS2Q13227 327 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 GPR18Q14330 331 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 KIAA1324Q6UXG2 1013 aaKnown RBP4.26□□□□□ -1.73
LINC01088-211ENST00000515597 RINLQ6ZS11 566 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 TMPRSS12Q86WS5 348 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 TMEM217Q8N7C4 229 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 CLEC18CQ8NCF0 446 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 BICD2Q8TD16 824 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 TM6SF1Q9BZW5 370 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 Q9N2J8 555 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 PLEKHB1Q9UF11 243 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-211ENST00000515597 ICAM5Q9UMF0 924 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 C19orf53Q9UNZ5 99 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-211ENST00000515597 LRCH1Q9Y2L9 728 aa4.26□□□□□ -1.73
LINC01088-211ENST00000515597 WDR81Q562E7 1941 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 TCRBV7S3A2A0A539 114 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 OR6C75A6NL08 312 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 SPRY3O43610 288 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 LCATP04180 440 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 CHRNB2P17787 502 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 PNLIPRP1P54315 467 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 SELENOVP59797 346 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 AP2B1P63010 937 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 Q0VFX4 171 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 UBE4AQ14139 1066 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 DCTN1Q14203 1278 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 SHBQ15464 509 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 DUSP6Q16828 381 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 GALNTL6Q49A17 601 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 SYCP2LQ5T4T6 812 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 LIN54Q6MZP7 749 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 PRSS57Q6UWY2 283 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 FAM83HQ6ZRV2 1179 aaPredicted RBP4.25□□□□□ -1.73
LINC01088-211ENST00000515597 CCDC25Q86WR0 208 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 CAMK1DQ8IU85 385 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 FAM217AQ8IXS0 508 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 SCAMP5Q8TAC9 235 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 CPT1BQ92523 772 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 HDHD5Q9BXW7 423 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 B3GNT4Q9C0J1 378 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 PABPC3Q9H361 631 aaKnown RBP4.25□□□□□ -1.73
LINC01088-211ENST00000515597 ABHD16BQ9H3Z7 469 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 ACTR5Q9H9F9 607 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms