RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PPP1R12AO14974 1030 aaPredicted RBP21.45■■□□□ 1.02
LSM6-207ENST00000515311 ZMPSTE24O75844 475 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 ASLP04424 464 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 POLR2EP19388 210 aaKnown RBP21.45■■□□□ 1.02
LSM6-207ENST00000515311 TNFRSF4P43489 277 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 ZXDAP98168 799 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 GRSF1Q12849 480 aaKnown RBP eCLIP21.45■■□□□ 1.02
LSM6-207ENST00000515311 XRCC4Q13426 336 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 TUBB2AQ13885 445 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 PON2Q15165 354 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 SIX1Q15475 284 aaPredicted RBP21.45■■□□□ 1.02
LSM6-207ENST00000515311 MBLAC2Q68D91 279 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 NETO2Q8NC67 525 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 FATE1Q969F0 183 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 HAUS1Q96CS2 278 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 TUBB2BQ9BVA1 445 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 HOMER3Q9NSC5 361 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 ELOVL2Q9NXB9 296 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 VPS51Q9UID3 782 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 MUC22E2RYF6 1773 aaPredicted RBP21.45■■□□□ 1.02
LSM6-207ENST00000515311 SHROOM3Q8TF72 1996 aa21.45■■□□□ 1.02
LSM6-207ENST00000515311 KRBA1A5PL33 1030 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 HACD1B0YJ81 288 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 PRRT4C9JH25 899 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 CBX4O00257 560 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 MAFKO60675 156 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 PRAMEF11O60813 436 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 MAP3K6O95382 1288 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 ATP5BP06576 529 aaKnown RBP21.44■■□□□ 1.02
LSM6-207ENST00000515311 GEMIN4P57678 1058 aaKnown RBP21.44■■□□□ 1.02
LSM6-207ENST00000515311 STARD6P59095 220 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 IL10RBQ08334 325 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 PPIDQ08752 370 aaKnown RBP21.44■■□□□ 1.02
LSM6-207ENST00000515311 E2F5Q15329 346 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 FSTL4Q6MZW2 842 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 RETSATQ6NUM9 610 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 ADAT2Q7Z6V5 191 aaKnown RBP21.44■■□□□ 1.02
LSM6-207ENST00000515311 ZNF354CQ86Y25 554 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 CAPZA3Q96KX2 299 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 PDFQ9HBH1 243 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 IPO11Q9UI26 975 aaKnown RBP21.44■■□□□ 1.02
LSM6-207ENST00000515311 R3HDM2Q9Y2K5 976 aaKnown RBP21.44■■□□□ 1.02
LSM6-207ENST00000515311 MRPS17Q9Y2R5 130 aaKnown RBP21.44■■□□□ 1.02
LSM6-207ENST00000515311 STARD13Q9Y3M8 1113 aa21.44■■□□□ 1.02
LSM6-207ENST00000515311 MCF2LO15068 1137 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 ZNF189O75820 626 aaPredicted RBP21.43■■□□□ 1.02
LSM6-207ENST00000515311 URI1O94763 535 aaPredicted RBP21.43■■□□□ 1.02
LSM6-207ENST00000515311 DLDP09622 509 aaKnown RBP21.43■■□□□ 1.02
LSM6-207ENST00000515311 CCNCP24863 283 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 VASPP50552 380 aaPredicted RBP21.43■■□□□ 1.02
LSM6-207ENST00000515311 EIF3EP60228 445 aaKnown RBP21.43■■□□□ 1.02
LSM6-207ENST00000515311 ECT2LQ008S8 904 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 SLC20A2Q08357 652 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 PRKD1Q15139 912 aaPredicted RBP21.43■■□□□ 1.02
LSM6-207ENST00000515311 TIGD7Q6NT04 549 aaPredicted RBP21.43■■□□□ 1.02
LSM6-207ENST00000515311 SIX5Q8N196 739 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 CCDC33Q8N5R6 958 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 SLC35B2Q8TB61 432 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 KCNV2Q8TDN2 545 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 QKIQ96PU8 341 aaKnown RBP eCLIP21.43■■□□□ 1.02
LSM6-207ENST00000515311 CIPCQ9C0C6 399 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 SP110Q9HB58 689 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 CDC23Q9UJX2 597 aa21.43■■□□□ 1.02
LSM6-207ENST00000515311 K7EQS6 105 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 SNAP91O60641 907 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 SRPRAP08240 638 aaKnown RBP21.42■■□□□ 1.02
LSM6-207ENST00000515311 GLDCP23378 1020 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 PAFAH1B1P43034 410 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 ARF5P84085 180 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 CCNG2Q16589 344 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 SLC45A4Q5BKX6 768 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 ARHGAP36Q6ZRI8 547 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 SFTPA1Q8IWL2 248 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 KDM1BQ8NB78 822 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 CCNYQ8ND76 341 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 CCDC26Q8TAB7 109 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 UCMAQ8WVF2 138 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 TFB1MQ8WVM0 346 aaKnown RBP21.42■■□□□ 1.02
LSM6-207ENST00000515311 EZH1Q92800 747 aaPredicted RBP21.42■■□□□ 1.02
LSM6-207ENST00000515311 EDAQ92838 391 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 NKD2Q969F2 451 aaPredicted RBP21.42■■□□□ 1.02
LSM6-207ENST00000515311 ZNF599Q96NL3 588 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 NELL2Q99435 816 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 LGMNQ99538 433 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 SMARCAL1Q9NZC9 954 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 SLC25A13Q9UJS0 675 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 HS3ST2Q9Y278 367 aa21.42■■□□□ 1.02
LSM6-207ENST00000515311 GOLGA6L10A0A0M3HER8 536 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 J3KR12 359 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 KRIT1O00522 736 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 NPC1O15118 1278 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 DCXO43602 365 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 LIASO43766 372 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 EGFP01133 1207 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 CCINQ13939 588 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 FBXO43Q4G163 708 aa21.41■■□□□ 1.02
LSM6-207ENST00000515311 DRICH1Q6PGQ1 229 aaPredicted RBP21.41■■□□□ 1.02
LSM6-207ENST00000515311 METTL3Q86U44 580 aaKnown RBP21.41■■□□□ 1.02
LSM6-207ENST00000515311 ZC3H18Q86VM9 953 aaKnown RBP21.41■■□□□ 1.02
LSM6-207ENST00000515311 CDKL3Q8IVW4 592 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms