RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 Q6ZVU0 165 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 AADATQ8N5Z0 425 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 DCAF4L2Q8NA75 395 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 C1orf216Q8TAB5 229 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 CENPIQ92674 756 aaPredicted RBP25.11■■□□□ 1.61
SNF8-213ENST00000514929 SLC32A1Q9H598 525 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 DNAAF2Q9NVR5 837 aaKnown RBP25.11■■□□□ 1.61
SNF8-213ENST00000514929 PPARGC1AQ9UBK2 798 aaKnown RBP25.11■■□□□ 1.61
SNF8-213ENST00000514929 ADAMTS1Q9UHI8 967 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 HS3ST2Q9Y278 367 aa25.11■■□□□ 1.61
SNF8-213ENST00000514929 ILVBLA1L0T0 632 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 SRCP12931 536 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 GOT1P17174 413 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 CD27P26842 260 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 AFF3P51826 1226 aaKnown RBP25.1■■□□□ 1.61
SNF8-213ENST00000514929 HDAC4P56524 1084 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 NCEH1Q6PIU2 408 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 DRC7Q8IY82 874 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 OR7D4Q8NG98 312 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 SPON2Q9BUD6 331 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 CBX8Q9HC52 389 aa25.1■■□□□ 1.61
SNF8-213ENST00000514929 MT-CO1P00395 513 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 PTMSP20962 102 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 NRG1Q02297 640 aaPredicted RBP25.09■■□□□ 1.61
SNF8-213ENST00000514929 TEAD4Q15561 434 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 ARTNQ5T4W7 220 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 FAM46CQ5VWP2 391 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 RWDD4Q6NW29 188 aaKnown RBP25.09■■□□□ 1.61
SNF8-213ENST00000514929 PPP1R2P3Q6NXS1 205 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 ZNF783Q6ZMS7 281 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 MCOLN2Q8IZK6 566 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 CCDC185Q8N715 623 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 OR2T34Q8NGX1 318 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 OR14C36Q8NHC7 312 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 MCEEQ96PE7 176 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 OSBPL2Q9H1P3 480 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 TM9SF3Q9HD45 589 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 FARP1Q9Y4F1 1045 aaPredicted RBP25.09■■□□□ 1.61
SNF8-213ENST00000514929 SLCO1B1Q9Y6L6 691 aa25.09■■□□□ 1.61
SNF8-213ENST00000514929 ASCC3Q8N3C0 2202 aaKnown RBP25.08■■□□□ 1.61
SNF8-213ENST00000514929 UPK3BL1B0FP48 263 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 UPK3BL2E5RIL1 263 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 C1QTNF3-AMACRE9PGA6 284 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 CBX4O00257 560 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 MCF2LO15068 1137 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 ALOX15BO15296 676 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 IGHV4-34P06331 123 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 CSNK1EP49674 416 aaKnown RBP25.08■■□□□ 1.61
SNF8-213ENST00000514929 ZNF252P-AS1Q0IIN9 211 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 SFMBT2Q5VUG0 894 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 DCUN1D2Q6PH85 259 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 LINGO4Q6UY18 593 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.08■■□□□ 1.61
SNF8-213ENST00000514929 LUZP1Q86V48 1076 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 CCDC114Q96M63 670 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 SYT11Q9BT88 431 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 ATP13A1Q9HD20 1204 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 OSGEPQ9NPF4 335 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 ZNF212Q9UDV6 495 aa25.08■■□□□ 1.61
SNF8-213ENST00000514929 DOCK4Q8N1I0 1966 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 A0A1B0GVT2 93 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 TCRBV5S1A1TA0A578 114 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 TMCO5BA8MYB1 307 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 K7ERQ8 282 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 CCP110O43303 1012 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 PLEKP08567 350 aaPredicted RBP25.07■■□□□ 1.6
SNF8-213ENST00000514929 DESP17661 470 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 GLDCP23378 1020 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 RRM1P23921 792 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 DRD3P35462 400 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 ZNF143P52747 638 aaPredicted RBP25.07■■□□□ 1.6
SNF8-213ENST00000514929 ADPRHP54922 357 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 GNA12Q03113 381 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 SLC14A1Q13336 389 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 NR1I3Q14994 352 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 MANEALQ5VSG8 457 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 RETSATQ6NUM9 610 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 SCYL2Q6P3W7 929 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 IL27RAQ6UWB1 636 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 PIP4P1Q86T03 277 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 PIP4K2CQ8TBX8 421 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 NTAN1Q96AB6 310 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 GAREM1Q9H706 876 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 TAS2R14Q9NYV8 317 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 SARDHQ9UL12 918 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 CACNA1EQ15878 2313 aa25.07■■□□□ 1.6
SNF8-213ENST00000514929 FAM72CH0Y354 149 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 GJB3O75712 270 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 CER1O95813 267 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 CD59P13987 128 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 RHOQP17081 205 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 CLCN6P51797 869 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 METAP1P53582 386 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 RPL7AP62424 266 aaKnown RBP25.06■■□□□ 1.6
SNF8-213ENST00000514929 BNC1Q01954 994 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 POM121L1PQ3SYA9 428 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 PPP1R15BQ5SWA1 713 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 FAM72AQ5TYM5 149 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 FAM72DQ6L9T8 149 aa25.06■■□□□ 1.6
SNF8-213ENST00000514929 ADAT2Q7Z6V5 191 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms