RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MPP6Q9NZW5 540 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 VPS51Q9UID3 782 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 PCOLCE2Q9UKZ9 415 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 SARDHQ9UL12 918 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 TPX2Q9ULW0 747 aaKnown RBP10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 ANKRD6Q9Y2G4 727 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 SNX11Q9Y5W9 270 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 USP24Q9UPU5 2620 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 ACACBO00763 2458 aa10.73□□□□□ -0.69
HMGXB3-205ENST00000514469 PLXNA2O75051 1894 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM47DPA6NHR8 397 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 C2CD4BA6NLJ0 364 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 MCF2LO15068 1137 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 FLRT2O43155 660 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC7A4O43246 635 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 LATO43561 262 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 PLRG1O43660 514 aaKnown RBP10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 SNAP91O60641 907 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 TRIM16O95361 564 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 ATP1A3P13637 1013 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 SPINK2P20155 84 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 SDC4P31431 198 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 CTSKP43235 329 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 PPP2CBP62714 309 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 PPP2CAP67775 309 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 ATP11AP98196 1134 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 NRG1Q02297 640 aaPredicted RBP10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 UBXN1Q04323 297 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 TRIP6Q15654 476 aaKnown RBP10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 ZNF423Q2M1K9 1284 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 C15orf59Q2T9L4 293 aaPredicted RBP10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 CCDC14Q49A88 953 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 RAB6CQ53S08 254 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 MANEALQ5VSG8 457 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 AGBL4Q5VU57 503 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM46CQ5VWP2 391 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 LRSAM1Q6UWE0 723 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 ZNF783Q6ZMS7 281 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 GLRX5Q86SX6 157 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 AOPEPQ8N6M6 819 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 OR14C36Q8NHC7 312 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 JOSD2Q8TAC2 188 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 RXFP2Q8WXD0 754 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC6A18Q96N87 628 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 BPIFA3Q9BQP9 254 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 SCNM1Q9BWG6 230 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 ZYG11BQ9C0D3 744 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 RAB6CQ9H0N0 254 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 TMEM63CQ9P1W3 806 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 PPARGC1AQ9UBK2 798 aaKnown RBP10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 PPM1HQ9ULR3 514 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 NEU3Q9UQ49 428 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 NEUROG3Q9Y4Z2 214 aa10.72□□□□□ -0.69
HMGXB3-205ENST00000514469 A0A0D9SEW6 157 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 ILVBLA1L0T0 632 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 C1QTNF3-AMACRE9PGA6 284 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 K7ERQ8 282 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 VILLO15195 856 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 HYAL3O43820 417 aaPredicted RBP10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 SRGAP2O75044 1071 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 RTN2O75298 545 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 GJB6O95452 261 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 MT-CO1P00395 513 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 WNT1P04628 370 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 CALB1P05937 261 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 CTSLP07711 333 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 FTH1P19P0C7X4 201 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 RRM1P23921 792 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 OR1E1P30953 314 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 CCT8P50990 548 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 CLCN6P51797 869 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 CNTN1Q12860 1018 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 SPEGQ15772 3267 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 CDO1Q16878 200 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 C22orf39Q6P5X5 142 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 UNQ6494/PRO21346Q6UXR6 183 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 MON1BQ7L1V2 547 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 STRADAQ7RTN6 431 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 RAB44Q7Z6P3 723 aaPredicted RBP10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 ADAT2Q7Z6V5 191 aaKnown RBP10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 ATP11CQ8NB49 1132 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 C3orf20Q8ND61 904 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 OR7D4Q8NG98 312 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 OR2A12Q8NGT7 310 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 PIP4K2CQ8TBX8 421 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 CENPIQ92674 756 aaPredicted RBP10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 GATA6Q92908 595 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 PCMTD1Q96MG8 357 aaPredicted RBP10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 ACE2Q9BYF1 805 aaPredicted RBP10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 KDM4CQ9H3R0 1056 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 ADAM22Q9P0K1 906 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 KLK13Q9UKR3 277 aa10.71□□□□□ -0.69
HMGXB3-205ENST00000514469 ZZEF1O43149 2961 aa10.71□□□□□ -0.7
HMGXB3-205ENST00000514469 CNOT1A5YKK6 2376 aaKnown RBP10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 CACNA1EQ15878 2313 aa10.7□□□□□ -0.7
HMGXB3-205ENST00000514469 CXorf51AA0A1B0GTR3 108 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms