RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SUN2Q9UH99 717 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 DMGDHQ9UI17 866 aaKnown RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 TBC1D30Q9Y2I9 924 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 PCDHGA2Q9Y5H1 932 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 SNX10Q9Y5X0 201 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 SDK1Q7Z5N4 2213 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 PIEZO1Q92508 2521 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 MYO16Q9Y6X6 1858 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 GPR179Q6PRD1 2367 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 KIF26AQ9ULI4 1882 aaPredicted RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 WASH3PC4AMC7 463 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 E9PAM4 449 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 MYO1FO00160 1098 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 CEP104O60308 925 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 LILRB5O75023 590 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 CNTN5O94779 1100 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 APBB3O95704 486 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 ASLP04424 464 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 DLDP09622 509 aaKnown RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 COMTP21964 271 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 L1CAMP32004 1257 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 PCK1P35558 622 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 GGCXP38435 758 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 NBL1P41271 181 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 WASP42768 502 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 FNTBP49356 437 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 NHLH1Q02575 133 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 SULT2A1Q06520 285 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 SCAPQ12770 1279 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 ENPP2Q13822 863 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 PIGHQ14442 188 aaPredicted RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 CYP1B1Q16678 543 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 BOLA3Q53S33 107 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 HEATR6Q6AI08 1181 aaKnown RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 C8orf74Q6P047 294 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 ZC3H14Q6PJT7 736 aaKnown RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 HDXQ7Z353 690 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 SETD3Q86TU7 594 aaPredicted RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 WDR5BQ86VZ2 330 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 ARFGAP1Q8N6T3 406 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 CCDC185Q8N715 623 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 NIPA2Q8N8Q9 360 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 CAVIN3Q969G5 261 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 GABRG3Q99928 467 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 FEM1AQ9BSK4 669 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 MAGEB5Q9BZ81 275 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 ZYG11BQ9C0D3 744 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 ZDHHC4Q9NPG8 344 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 SMARCAL1Q9NZC9 954 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 INTS6Q9UL03 887 aaKnown RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 FZD10Q9ULW2 581 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 STON1Q9Y6Q2 735 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 EP300Q09472 2414 aaPredicted RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 HELZP42694 1942 aaKnown RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 COL4A2P08572 1712 aa8.54□□□□□ -1.04
CCL28-204ENST00000514421 ZFHX2Q9C0A1 2572 aaPredicted RBP8.54□□□□□ -1.04
CCL28-204ENST00000514421 A0A1W2PQF6 199 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 PROB1E7EW31 1015 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 AXIN1O15169 862 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 PRPSAP2O60256 369 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 SYNCRIPO60506 623 aaKnown RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 PROSCO94903 275 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 SEC31AO94979 1220 aaKnown RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 SRPRAP08240 638 aaKnown RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 HOXB2P14652 356 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 RHOQP17081 205 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 MZF1P28698 734 aaPredicted RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 MIPP30301 263 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 HOXC13P31276 330 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 NNMTP40261 264 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 CSKP41240 450 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 PXNP49023 591 aaPredicted RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 ST8SIA6P61647 398 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ECT2LQ008S8 904 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 DMWDQ09019 674 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ZNF234Q14588 700 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 STARD3Q14849 445 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 PTPRNQ16849 979 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 PLEKHG6Q3KR16 790 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 ALFQ53S48 1182 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 PITRM1Q5JRX3 1037 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 EFHC2Q5JST6 749 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ARTNQ5T4W7 220 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 C6orf118Q5T5N4 469 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ERMARDQ5T6L9 678 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 LRRC38Q5VT99 294 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 CXorf57Q6NSI4 855 aaKnown RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 RWDD4Q6NW29 188 aaKnown RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 EMBQ6PCB8 327 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 ZNF783Q6ZMS7 281 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 RASSF3Q86WH2 238 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 CIR1Q86X95 450 aaPredicted RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 PSTKQ8IV42 348 aaKnown RBP8.53□□□□□ -1.04
CCL28-204ENST00000514421 SPNS2Q8IVW8 549 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 IFT20Q8IY31 132 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 APCDD1Q8J025 514 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 KRT222Q8N1A0 295 aa8.53□□□□□ -1.04
CCL28-204ENST00000514421 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms