RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ASAP2O43150 1006 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CSDE1O75534 798 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 RHOP08100 348 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 PLA2G2AP14555 144 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 HNRNPLP14866 589 aaKnown RBP eCLIP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 RPL17P18621 184 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 FGFR4P22455 802 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 FCARP24071 287 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 DDX6P26196 483 aaKnown RBP eCLIP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 HOXA11P31270 313 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SFNP31947 248 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 RARRES1P49788 294 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 KPNA1P52294 538 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SIM1P81133 766 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CREB5Q02930 508 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 POU5F1BQ06416 359 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 FCHO2Q0JRZ9 810 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SEMA3BQ13214 749 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF169Q14929 603 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CCDC6Q16204 474 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 PSMD5Q16401 504 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 FAM214AQ32MH5 1076 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 LONRF3Q496Y0 759 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ARHGAP29Q52LW3 1261 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 XKR3Q5GH77 459 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CYP4A22Q5TCH4 519 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 KIAA1614Q5VZ46 1190 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CCNI2Q6ZMN8 369 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 UBE2R2Q712K3 238 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF589Q86UQ0 364 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 PLA2G4DQ86XP0 818 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 AHI1Q8N157 1196 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 PPM1KQ8N3J5 372 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 LRRC71Q8N4P6 559 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SH2D3CQ8N5H7 860 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF713Q8N859 430 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 DEFB124Q8NES8 71 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CCDC26Q8TAB7 109 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 PPP1R14CQ8TAE6 165 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF461Q8TAF7 563 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ADAMTS14Q8WXS8 1223 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ERCC4Q92889 916 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 EXOC4Q96A65 974 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CCDC51Q96ER9 411 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 IFT122Q9HBG6 1241 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 RIC8AQ9NPQ8 531 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 MIOSQ9NXC5 875 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SUCLA2Q9P2R7 463 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 GABBR1Q9UBS5 961 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 DNAI1Q9UI46 699 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 TPCN1Q9ULQ1 816 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC8A2Q9UPR5 921 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 KALRNO60229 2985 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 EML5Q05BV3 1969 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 COL4A2P08572 1712 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 IGLV3-22A0A075B6J6 115 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 A0A0A6YYJ9 748 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CCDC194A0A1B0GVG4 234 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 TCRBV16S1A1N1A0A5B0 115 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 WDR27A2RRH5 827 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CYSRT1A8MQ03 144 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 E9PAM4 449 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 FAM86B1E9PN63 330 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 SPECC1L-ADORA2AF8WAN1 911 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CAPN9O14815 690 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 TRAPPC3O43617 180 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 OPA1O60313 960 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 ABLIM3O94929 683 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 FSBPO95073 299 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 FAM86B2P0C5J1 330 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CALM1P0DP23 149 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CALM2P0DP24 149 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CALM3P0DP25 149 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 SDSP20132 328 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 ELF1P32519 619 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 OR1D2P34982 312 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 HOXD12P35452 270 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 SREBF1P36956 1147 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CACNA2D1P54289 1103 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 PDE1AP54750 535 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 GYS2P54840 703 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 IRX4P78413 519 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 IRF9Q00978 393 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 SETQ01105 290 aaPredicted RBP4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 GRIK3Q13003 919 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC14A1Q13336 389 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 FBXO43Q4G163 708 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 TTC38Q5R3I4 469 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 RNF187Q5TA31 235 aaPredicted RBP4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 FAM171A1Q5VUB5 890 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 TCEAL6Q6IPX3 200 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 NOTUMQ6P988 496 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CRELD2Q6UXH1 353 aaPredicted RBP4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 VITQ6UXI7 678 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CYB5R4Q7L1T6 521 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 SYT13Q7L8C5 426 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 HAUS6Q7Z4H7 955 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 RHPN2Q8IUC4 686 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 YAF2Q8IY57 180 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 TCEAL8Q8IYN2 117 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms