RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 IRF7Q92985 503 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KAZALD1Q96I82 304 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 DUSP16Q9BY84 665 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ZFYVE1Q9HBF4 777 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 AGPAT5Q9NUQ2 364 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 OR12D3Q9UGF7 316 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ZNF112Q9UJU3 913 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 AGO1Q9UL18 857 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 F8VZ95 297 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ATMINO43313 823 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 AGXTP21549 392 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PSMD8P48556 350 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 DGKGP49619 791 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 RPS7P62081 194 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 KDSRQ06136 332 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ACSM2AQ08AH3 577 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CBX2Q14781 532 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 AP5B1Q2VPB7 878 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PCID2Q5JVF3 399 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 WLSQ5T9L3 541 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ACSM2BQ68CK6 577 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 C11orf63Q6NUN7 778 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 GALNT13Q8IUC8 556 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 EMC1Q8N766 993 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SPATA20Q8TB22 786 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 BRI3BPQ8WY22 251 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 LRRC39Q96DD0 335 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ZBTB45Q96K62 511 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 CCT7Q99832 543 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KCNN2Q9H2S1 579 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ARL15Q9NXU5 204 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SUSD2Q9UGT4 822 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CDC14AQ9UNH5 594 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ARL2BPQ9Y2Y0 163 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 OR10H1Q9Y4A9 318 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 TAF6LQ9Y6J9 622 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PTPRJQ12913 1337 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CNTNAP1P78357 1384 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 THRAP10827 490 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 NDUFS1P28331 727 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 FMR1Q06787 632 aaKnown RBP eCLIP4.31□□□□□ -1.72
VCAN-209ENST00000513016 CSHL1Q14406 222 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 STXBP5Q5T5C0 1151 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 GPSM1Q86YR5 675 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PSTKQ8IV42 348 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 MOSPD2Q8NHP6 518 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 FAM120BQ96EK7 910 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 SGF29Q96ES7 293 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 RNF186Q9NXI6 227 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 NCF1BA6NI72 391 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 NCF1CA8MVU1 366 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 C9J4A7 227 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KLHL41O60662 606 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SLC25A12O75746 678 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 AKAP3O75969 853 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 RASGRP1O95267 797 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 FAM163BP0C2L3 166 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 NCF1P14598 390 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 LPOP22079 712 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 LBX1P52954 281 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 RRP1BQ14684 758 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 CCDC85BQ15834 202 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 PARP15Q460N3 678 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ATP6AP1LQ52LC2 224 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KCNT1Q5JUK3 1230 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 C1orf186Q6ZWK4 172 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SLC26A11Q86WA9 606 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 IFNEQ86WN2 208 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 RASAL3Q86YV0 1011 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SCUBE3Q8IX30 993 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KIAA1143Q96AT1 154 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 MAGED4Q96JG8 741 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ACBD6Q9BR61 282 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 NIFKQ9BYG3 293 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 UNC93B1Q9H1C4 597 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 HCN3Q9P1Z3 774 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SLC24A2Q9UI40 661 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PLAGL2Q9UPG8 496 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SIGLEC16A6NMB1 481 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 E5RJQ4 531 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 APOA1P02647 267 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PGM1P36871 562 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CLK2P49760 499 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 CCT8P50990 548 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SLC12A3P55017 1021 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CHRNB3Q05901 458 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 MSLNQ13421 630 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 ELOAQ14241 798 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 DDR2Q16832 855 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 INTS6LQ5JSJ4 861 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 C9orf57Q5W0N0 161 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ABHD15Q6UXT9 468 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 USP49Q70CQ1 688 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SPATA21Q7Z572 469 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 DPP10Q8N608 796 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CASKIN2Q8WXE0 1202 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 THOC1Q96FV9 657 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 SLC38A3Q99624 504 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 COPS8Q99627 209 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CHP1Q99653 195 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms