RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 NNMTP40261 264 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 RGS7P49802 495 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 CLDN2P57739 230 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 CDKN3Q16667 212 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 FAM46CQ5VWP2 391 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 GUSBP11Q6P575 273 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 INTS8Q75QN2 995 aaKnown RBP12.57□□□□□ -0.4
DDR1-267ENST00000512336 EFL1Q7Z2Z2 1120 aaKnown RBP12.57□□□□□ -0.4
DDR1-267ENST00000512336 DSG4Q86SJ6 1040 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 CLEC14AQ86T13 490 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 LGI2Q8N0V4 545 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 SLC22A18ASQ8N1D0 253 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 SCML4Q8N228 414 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 ARL14Q8N4G2 192 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 KCTD13Q8WZ19 329 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 OR8D1Q8WZ84 308 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 EXTL1Q92935 676 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 GRAMD1AQ96CP6 724 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 ARHGAP9Q9BRR9 750 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 DUSP23Q9BVJ7 150 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 PREBQ9HCU5 417 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 ANKMY1Q9P2S6 941 aa12.57□□□□□ -0.4
DDR1-267ENST00000512336 XPO7Q9UIA9 1087 aaKnown RBP12.57□□□□□ -0.4
DDR1-267ENST00000512336 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 C1QTNF3-AMACRE9PGA6 284 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 CALUO43852 315 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 TNFSF15O95150 251 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 LTFP02788 710 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 SETSIPP0DME0 302 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 CD19P15391 556 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 PDGFRAP16234 1089 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 ITGB6P18564 788 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 NR2F2P24468 414 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 AKT2P31751 481 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 ZNF177Q13360 481 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 DRAP1Q14919 205 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 ZNF284Q2VY69 593 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 KRT39Q6A163 491 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 GCNT7Q6ZNI0 430 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 RBM44Q6ZP01 1051 aaKnown RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 GAS2L3Q86XJ1 694 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 FAM186BQ8IYM0 893 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 ZNF548Q8NEK5 533 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 WDR36Q8NI36 951 aaKnown RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 CLEC4CQ8WTT0 213 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 TRIM44Q96DX7 344 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 EEF2KMTQ96G04 330 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 FAXDC2Q96IV6 333 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 GDPD2Q9HCC8 539 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 DNAJC28Q9NX36 388 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 RAB20Q9NX57 234 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 ATXN7L1Q9ULK2 861 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 PPM1HQ9ULR3 514 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 TRAF3IP3Q9Y228 551 aa12.56□□□□□ -0.4
DDR1-267ENST00000512336 USP9XQ93008 2570 aaPredicted RBP12.56□□□□□ -0.4
DDR1-267ENST00000512336 SYCE3A1L190 88 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 O00370 1275 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 CASC3O15234 703 aaKnown RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 FAM87AP0C7U9 286 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 ZNF18P17022 549 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 HNRNPA2B1P22626 353 aaKnown RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 MXI1P50539 228 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 HNRNPKP61978 463 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDR1-267ENST00000512336 SRSF6Q13247 344 aaKnown RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 FOXD4L6Q3SYB3 417 aaPredicted RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 RAP1GAP2Q684P5 730 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 OR6B2Q6IFH4 312 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 ZCCHC8Q6NZY4 707 aaKnown RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 XKR5Q6UX68 686 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 FOXD4L3Q6VB84 417 aaPredicted RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 Q6ZVU0 165 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 USP53Q70EK8 1073 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 ABI3BPQ7Z7G0 1075 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 CHSY1Q86X52 802 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 CIR1Q86X95 450 aaPredicted RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 FBXL13Q8NEE6 735 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 DQX1Q8TE96 717 aaKnown RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 SGF29Q96ES7 293 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 IFT43Q96FT9 208 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 SLC39A13Q96H72 371 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 SERPINB11Q96P15 392 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 TLR6Q9Y2C9 796 aa12.55□□□□□ -0.4
DDR1-267ENST00000512336 TDRD6O60522 2096 aaKnown RBP12.55□□□□□ -0.4
DDR1-267ENST00000512336 MYO9AB2RTY4 2548 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 EME2A4GXA9 379 aaPredicted RBP12.54□□□□□ -0.4
DDR1-267ENST00000512336 MCF2LO15068 1137 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 BNIP3LO60238 219 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
DDR1-267ENST00000512336 GJB6O95452 261 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 YEATS4O95619 227 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 AFPP02771 609 aaKnown RBP12.54□□□□□ -0.4
DDR1-267ENST00000512336 FYNP06241 537 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 ITGA2BP08514 1039 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 TACR2P21452 398 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 GTF2H1P32780 548 aa12.54□□□□□ -0.4
DDR1-267ENST00000512336 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
DDR1-267ENST00000512336 SULT2A1Q06520 285 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms