RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PALM2Q8IXS6 379 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 VPS52Q8N1B4 723 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 PAQR4Q8N4S7 273 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 TTC39CQ8N584 583 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 FAM110DQ8TAY7 271 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 ACTRT2Q8TDY3 377 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 KIF1BPQ96EK5 621 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 MAP7D2Q96T17 732 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 PIP5K1AQ99755 562 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 STRA6Q9BX79 667 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 Q9N2J8 555 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 ASNSD1Q9NWL6 643 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 TFCP2L1Q9NZI6 479 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 ADD3Q9UEY8 706 aaKnown RBP5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 FBXO40Q9UH90 709 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 KCNE2Q9Y6J6 123 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 hCG_1807616A0A1W2PRN6 198 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 TCRBV5S1A1TA0A578 114 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 BCAT2O15382 392 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 ADRB2P07550 413 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 ACTN2P35609 894 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 CLK3P49761 638 aaKnown RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 RHAGQ02094 409 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 PLP2Q04941 152 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 PTPAQ15257 358 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 PLEKHS1Q5SXH7 462 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 CFAP58Q5T655 872 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 FNDC7Q5VTL7 733 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 ZKSCAN2Q63HK3 967 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 SLC30A9Q6PML9 568 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 PRRT2Q7Z6L0 340 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 C16orf71Q8IYS4 520 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 LCORLQ8N3X6 602 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 CPXM2Q8N436 756 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 NKAIN3Q8N8D7 197 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 SCFD2Q8WU76 684 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 ZFPM2Q8WW38 1151 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 CELF1Q92879 486 aaKnown RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 FEM1CQ96JP0 617 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 C20orf173Q96LM9 149 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 FYTTD1Q96QD9 318 aaKnown RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 FRG2BQ96QU4 278 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 ABHD14AQ9BUJ0 271 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 CADM1Q9BY67 442 aaKnown RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 TRIM2Q9C040 744 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 PCDHB16Q9NRJ7 776 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 NCKIPSDQ9NZQ3 722 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 LIMA1Q9UHB6 759 aaKnown RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 EPN1Q9Y6I3 576 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 COL4A3Q01955 1670 aa5.84□□□□□ -1.47
HMGB1P47-201ENST00000511281 TEX13CA0A0J9YWL9 993 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 OR6C68A6NDL8 312 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 TUBB4AP04350 444 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 EIF2S1P05198 315 aaKnown RBP5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 SPARCP09486 303 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZNF8P17098 575 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 ACSL1P33121 698 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 IDUAP35475 653 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 HADHAP40939 763 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 OLR1P78380 273 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 EFEMP1Q12805 493 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 CHAF1BQ13112 559 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 BECN1Q14457 450 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 TRIM72Q6ZMU5 477 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 RNF144BQ7Z419 303 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 PRPF39Q86UA1 669 aaKnown RBP5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 SLC44A3Q8N4M1 653 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 ARHGEF2Q92974 986 aaKnown RBP5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 FAM149B1Q96BN6 582 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 INTS12Q96CB8 462 aaKnown RBP5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 DAZAP1Q96EP5 407 aaKnown RBP5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 KLHL15Q96M94 604 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 HS6ST2Q96MM7 605 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 SLC2A4RGQ9NR83 387 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 IL1RAPL1Q9NZN1 696 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 EHD2Q9NZN4 543 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 LRIT1Q9P2V4 623 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 PEMTQ9UBM1 199 aa5.83□□□□□ -1.48
HMGB1P47-201ENST00000511281 EMSYQ7Z589 1322 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 GRID2IPA4D2P6 1211 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 PTGES3LE9PB15 166 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 C1QTNF3-AMACRE9PGA6 284 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 P4HA2O15460 535 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 CEP104O60308 925 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 PAGE4O60829 102 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 STARD3NLO95772 234 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 KRT20P35900 424 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 SOX2P48431 317 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 VPS41P49754 854 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 SOX10P56693 466 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 HOXA4Q00056 320 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZBTB16Q05516 673 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 NEXNQ0ZGT2 675 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 TMEM115Q12893 351 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 FOXE3Q13461 319 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZNF169Q14929 603 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 PLK5Q496M5 336 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 CEP85Q6P2H3 762 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 SARM1Q6SZW1 724 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms