RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 MLH1P40692 756 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 ALDH3B2P48448 385 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 CLCN3P51790 818 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 RAB15P59190 212 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 DNAJB13P59910 316 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 SULT2A1Q06520 285 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 ZNF33AQ06730 810 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 USP4Q13107 963 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 TTLL12Q14166 644 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 PSMD5Q16401 504 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 LY6KQ17RY6 165 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 LSM12Q3MHD2 195 aaKnown RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 KCTD11Q693B1 232 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 NAPRTQ6XQN6 538 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 HACD2Q6Y1H2 254 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 CMC1Q7Z7K0 106 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 ACOT1Q86TX2 421 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 ERI1Q8IV48 349 aaKnown RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 CROCCP3Q8IVE0 287 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 CCDC117Q8IWD4 279 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 CHERPQ8IWX8 916 aaKnown RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 ZNF567Q8N184 647 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 PLD6Q8N2A8 252 aaKnown RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 LRRC43Q8N309 656 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 AFAP1L2Q8N4X5 818 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 CCDC185Q8N715 623 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 C12orf29Q8N999 325 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 HIPK4Q8NE63 616 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 BEST2Q8NFU1 509 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 HM13Q8TCT9 377 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 MAPK15Q8TD08 544 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 DIS3LQ8TF46 1054 aaKnown RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 STYXQ8WUJ0 223 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 NLRP7Q8WX94 980 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 NTAN1Q96AB6 310 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 ZNF669Q96BR6 464 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 NMD3Q96D46 503 aaKnown RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 ASB9Q96DX5 294 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 ZNF597Q96LX8 424 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 BIRC8Q96P09 236 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 FCRL3Q96P31 734 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 AGAP3Q96P47 875 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 OR52B2Q96RD2 323 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 UHRF1Q96T88 793 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 LGMNQ99538 433 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 MRPL45Q9BRJ2 306 aaKnown RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 ACE2Q9BYF1 805 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 SENP6Q9GZR1 1112 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 SPATC1LQ9H0A9 340 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 RHOJQ9H4E5 214 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 WDR41Q9HAD4 459 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 C8orf4Q9NR00 106 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 SETD4Q9NVD3 440 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 TUBA8Q9NY65 449 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.26□□□□□ -0.93
SNF8-210ENST00000511214 SLC17A6Q9P2U8 582 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 TLK1Q9UKI8 766 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 VANGL2Q9ULK5 521 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 STAP1Q9ULZ2 295 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 AK5Q9Y6K8 562 aa9.26□□□□□ -0.93
SNF8-210ENST00000511214 MGAMO43451 1857 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 RALGAPA2Q2PPJ7 1873 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 WDR90Q96KV7 1748 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 FAM155AB1AL88 458 aaPredicted RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 TARM1B6A8C7 271 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 IRF6O14896 467 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 XPO1O14980 1071 aaKnown RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 DCLK1O15075 740 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 GALR2O43603 387 aaPredicted RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 OR6B1O95007 311 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 ARIH2O95376 493 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 PGM3O95394 542 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 PIGNO95427 931 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 IQCF3P0C7M6 154 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 FAM200BP0CF97 657 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 DPEP1P16444 411 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 PSMC3P17980 439 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 TFEBP19484 476 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 TFE3P19532 575 aaPredicted RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 CYP2B6P20813 491 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 MPSTP25325 297 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 PTPN3P26045 913 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 NOS2P35228 1153 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 RANBP1P43487 201 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 GRIA4P48058 902 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 SULT1E1P49888 294 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 ERFP50548 548 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 CDK9P50750 372 aaKnown RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 CRADDP78560 199 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 MRPS22P82650 360 aaKnown RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 PPIDQ08752 370 aaKnown RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 SCAPQ12770 1279 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 ILF2Q12905 390 aaKnown RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 STX5Q13190 355 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 DCTN2Q13561 401 aaKnown RBP9.25□□□□□ -0.93
SNF8-210ENST00000511214 SLC12A1Q13621 1099 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 CEACAM7Q14002 265 aa9.25□□□□□ -0.93
SNF8-210ENST00000511214 PCBP1Q15365 356 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNF8-210ENST00000511214 ZBTB6Q15916 424 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms