RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 EFHD1Q9BUP0 239 aa6.05□□□□□ -1.44
CHD1-206ENST00000511067 VEZTQ9HBM0 779 aa6.05□□□□□ -1.44
CHD1-206ENST00000511067 Q9N2J8 555 aa6.05□□□□□ -1.44
CHD1-206ENST00000511067 TBC1D22BQ9NU19 505 aa6.05□□□□□ -1.44
CHD1-206ENST00000511067 HDAC6Q9UBN7 1215 aa6.05□□□□□ -1.44
CHD1-206ENST00000511067 FBXO40Q9UH90 709 aa6.05□□□□□ -1.44
CHD1-206ENST00000511067 FBXO2Q9UK22 296 aaPredicted RBP6.05□□□□□ -1.44
CHD1-206ENST00000511067 SLC8A2Q9UPR5 921 aa6.05□□□□□ -1.44
CHD1-206ENST00000511067 WDR33Q9C0J8 1336 aaKnown RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 OR6C68A6NDL8 312 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 STRNO43815 780 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 ST6GAL1P15907 406 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 EPHA8P29322 1005 aaPredicted RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 TFF2Q03403 129 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 SLC18A3Q16572 532 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 PLK5Q496M5 336 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 C5orf22Q49AR2 442 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 ARL13AQ5H913 290 aaPredicted RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 FAM171A1Q5VUB5 890 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 NEK10Q6ZWH5 1172 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 SCAIQ8N9R8 606 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 SETD9Q8NE22 299 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 OSR1Q8TAX0 266 aaPredicted RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 HASPINQ8TF76 798 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 AGAP2Q99490 1192 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 MRIQ9BWK5 157 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 MLXIPLQ9NP71 852 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 BLOC1S4Q9NUP1 217 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 TAS2R10Q9NYW0 307 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 KCND2Q9NZV8 630 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 ORC3Q9UBD5 711 aaPredicted RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 IPO11Q9UI26 975 aaKnown RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 ING1Q9UK53 422 aaPredicted RBP6.04□□□□□ -1.44
CHD1-206ENST00000511067 CLDN16Q9Y5I7 305 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 SCINQ9Y6U3 715 aa6.04□□□□□ -1.44
CHD1-206ENST00000511067 KDM3AQ9Y4C1 1321 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 C17orf113A0A1B0GUU1 675 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 CD63P08962 238 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 BDNFP23560 247 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 PSMA4P25789 261 aaKnown RBP6.03□□□□□ -1.44
CHD1-206ENST00000511067 TGFB2P61812 414 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 YPEL5P62699 121 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 ZBTB16Q05516 673 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 KIAA1755Q5JYT7 1200 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 STRIP1Q5VSL9 837 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 NAPEPLDQ6IQ20 393 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 LRIG3Q6UXM1 1119 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 TMTC3Q6ZXV5 915 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 PTF1AQ7RTS3 328 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 UBE2Q1Q7Z7E8 422 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 CHD1LQ86WJ1 897 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 BOLLQ8N9W6 283 aaKnown RBP6.03□□□□□ -1.44
CHD1-206ENST00000511067 NELL1Q92832 810 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 MAP4K1Q92918 833 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 TEFMQ96QE5 360 aaKnown RBP6.03□□□□□ -1.44
CHD1-206ENST00000511067 NR1H4Q96RI1 486 aaPredicted RBP6.03□□□□□ -1.44
CHD1-206ENST00000511067 TREX2Q9BQ50 279 aaPredicted RBP6.03□□□□□ -1.44
CHD1-206ENST00000511067 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.03□□□□□ -1.44
CHD1-206ENST00000511067 MPP6Q9NZW5 540 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 SARDHQ9UL12 918 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 DHDHQ9UQ10 334 aa6.03□□□□□ -1.44
CHD1-206ENST00000511067 SLC22A23A1A5C7 686 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 PGPEP1LA6NFU8 196 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 LRRC3CA6NJW4 275 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 MSI1O43347 362 aaKnown RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 TNFSF14O43557 240 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 SCGB1D1O95968 90 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 SLPIP03973 132 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 CLEC3BP05452 202 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 URODP06132 367 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 LCKP06239 509 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 CHRNA5P30532 468 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 SKIV2L2P42285 1042 aaKnown RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 BLKP51451 505 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 NAP1L1P55209 391 aaKnown RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 NHLH1Q02575 133 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 SLC10A2Q12908 348 aaPredicted RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 TDGQ13569 410 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 GALNT3Q14435 633 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 ZNF268Q14587 947 aaPredicted RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 MEX3CQ5U5Q3 659 aaKnown RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 CCDC30Q5VVM6 783 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 C17orf99Q6UX52 265 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 RRM2BQ7LG56 351 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 ARL14EPQ8N8R7 260 aaPredicted RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 IP6K1Q92551 441 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 CLMNQ96JQ2 1002 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 IFT27Q9BW83 186 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 FRMD8Q9BZ67 464 aaPredicted RBP6.02□□□□□ -1.45
CHD1-206ENST00000511067 SLC25A18Q9H1K4 315 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 ZDHHC7Q9NXF8 308 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 TBC1D14Q9P2M4 693 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 ZNHIT2Q9UHR6 403 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 FBXO4Q9UKT5 387 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 NAALADL1Q9UQQ1 740 aa6.02□□□□□ -1.45
CHD1-206ENST00000511067 ZNF335Q9H4Z2 1342 aaPredicted RBP6.01□□□□□ -1.45
CHD1-206ENST00000511067 TCRBV7S3A2A0A539 114 aa6.01□□□□□ -1.45
CHD1-206ENST00000511067 USO1O60763 962 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms