RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 BRAFP15056 766 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 CYP2B6P20813 491 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 ADRA1DP25100 572 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 ACVR2AP27037 513 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 TACR3P29371 465 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 CCND3P30281 292 aaPredicted RBP7.46□□□□□ -1.22
USP53-206ENST00000510737 KCNJ4P48050 445 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 CPA2P48052 419 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 FHL3Q13643 280 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 KCNAB1Q14722 419 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 EARS2Q5JPH6 523 aaKnown RBP7.46□□□□□ -1.22
USP53-206ENST00000510737 GRHL2Q6ISB3 625 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 FASTKD5Q7L8L6 764 aaKnown RBP7.46□□□□□ -1.22
USP53-206ENST00000510737 SPATA3Q8NHX4 192 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 CHST8Q9H2A9 424 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 TYW1Q9NV66 732 aaKnown RBP7.46□□□□□ -1.22
USP53-206ENST00000510737 BABAM1Q9NWV8 329 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 CWC25Q9NXE8 425 aaPredicted RBP7.46□□□□□ -1.22
USP53-206ENST00000510737 WWOXQ9NZC7 414 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 MAFFQ9ULX9 164 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 SLC27A6Q9Y2P4 619 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 SLC45A1Q9Y2W3 748 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 MGAMO43451 1857 aa7.46□□□□□ -1.22
USP53-206ENST00000510737 CHD9Q3L8U1 2897 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 PRPF3O43395 683 aaKnown RBP7.45□□□□□ -1.22
USP53-206ENST00000510737 PDGFRBP09619 1106 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 ITGB8P26012 769 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 IGHMBP2P38935 993 aaKnown RBP7.45□□□□□ -1.22
USP53-206ENST00000510737 CPT1AP50416 773 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 CNGA2Q16280 664 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 SMRP1Q8NCR6 262 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 SMCR8Q8TEV9 937 aaPredicted RBP7.45□□□□□ -1.22
USP53-206ENST00000510737 AS3MTQ9HBK9 375 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 SEMA4BQ9NPR2 832 aaPredicted RBP7.45□□□□□ -1.22
USP53-206ENST00000510737 VPS45Q9NRW7 570 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 HYPKQ9NX55 129 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 ZIM2Q9NZV7 527 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 AFF4Q9UHB7 1163 aaKnown RBP7.45□□□□□ -1.22
USP53-206ENST00000510737 SIRT4Q9Y6E7 314 aaPredicted RBP7.45□□□□□ -1.22
USP53-206ENST00000510737 ZHX2Q9Y6X8 837 aa7.45□□□□□ -1.22
USP53-206ENST00000510737 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.44□□□□□ -1.22
USP53-206ENST00000510737 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.44□□□□□ -1.22
USP53-206ENST00000510737 CFAP69A5D8W1 941 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 INPPL1O15357 1258 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 PLAUP00749 431 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 TXNP10599 105 aaKnown RBP7.44□□□□□ -1.22
USP53-206ENST00000510737 HTR7P34969 479 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 FMO1Q01740 532 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 SLC29A2Q14542 456 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 FAM110CQ1W6H9 321 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 APOBEC3HQ6NTF7 200 aaKnown RBP7.44□□□□□ -1.22
USP53-206ENST00000510737 CLEC9AQ6UXN8 241 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 TDRD7Q8NHU6 1098 aaKnown RBP7.44□□□□□ -1.22
USP53-206ENST00000510737 TIFAQ96CG3 184 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 TRMT61AQ96FX7 289 aaKnown RBP7.44□□□□□ -1.22
USP53-206ENST00000510737 MPHOSPH8Q99549 860 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 MLXIPQ9HAP2 919 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 DDX56Q9NY93 547 aaKnown RBP7.44□□□□□ -1.22
USP53-206ENST00000510737 USP34Q70CQ2 3546 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 ARAP2Q8WZ64 1704 aa7.44□□□□□ -1.22
USP53-206ENST00000510737 ISM1B1AKI9 464 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 PI4K2BG5E9Z4 385 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 CHL1O00533 1208 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 FRS3O43559 492 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 ZKSCAN1P17029 563 aaPredicted RBP7.43□□□□□ -1.22
USP53-206ENST00000510737 PPP2R1AP30153 589 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 COPAP53621 1224 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 CCL14Q16627 93 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 PFKFB3Q16875 520 aaPredicted RBP7.43□□□□□ -1.22
USP53-206ENST00000510737 FKBP1CQ5VVH2 108 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 SLC39A5Q6ZMH5 540 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 SESTD1Q86VW0 696 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 RAVER1Q8IY67 606 aaKnown RBP7.43□□□□□ -1.22
USP53-206ENST00000510737 MPLKIPQ8TAP9 179 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 HIST1H2AAQ96QV6 131 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 STEAP1Q9UHE8 339 aa7.43□□□□□ -1.22
USP53-206ENST00000510737 DOCK3Q8IZD9 2030 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 FAM227AF5H4B4 570 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 IGKV5-2P06315 115 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 CD19P15391 556 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 BTF3P20290 206 aaKnown RBP7.42□□□□□ -1.22
USP53-206ENST00000510737 GALNSP34059 522 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 RIPK4P57078 832 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 B4GALNT1Q00973 533 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 MANEALQ5VSG8 457 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 PLAG1Q6DJT9 500 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 ZNF793Q6ZN11 406 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 FAM151AQ8WW52 585 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 USP6NLQ92738 828 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 FCRL5Q96RD9 977 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 SELENOOQ9BVL4 669 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 NUAK2Q9H093 628 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 SAP30LQ9HAJ7 183 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 TPCN1Q9ULQ1 816 aa7.42□□□□□ -1.22
USP53-206ENST00000510737 TCF20Q9UGU0 1960 aaKnown RBP7.42□□□□□ -1.22
USP53-206ENST00000510737 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
USP53-206ENST00000510737 ZNF814B7Z6K7 855 aa7.41□□□□□ -1.22
USP53-206ENST00000510737 TPH1P17752 444 aa7.41□□□□□ -1.22
USP53-206ENST00000510737 HOXA7P31268 230 aaPredicted RBP7.41□□□□□ -1.22
USP53-206ENST00000510737 CDKN2AP42771 156 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms