RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 AADATQ8N5Z0 425 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 ZNF557Q8N988 423 aaPredicted RBP13.9□□□□□ -0.18
SNF8-206ENST00000509989 CHST14Q8NCH0 376 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 PIGKQ92643 395 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 PRCCQ92733 491 aaPredicted RBP13.9□□□□□ -0.18
SNF8-206ENST00000509989 VOPP1Q96AW1 172 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 TBC1D31Q96DN5 1066 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 GPR174Q9BXC1 333 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 RSPH9Q9H1X1 276 aaPredicted RBP13.9□□□□□ -0.18
SNF8-206ENST00000509989 TNKS2Q9H2K2 1166 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 TMEM248Q9NWD8 314 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 AP4E1Q9UPM8 1137 aa13.9□□□□□ -0.18
SNF8-206ENST00000509989 BZW2Q9Y6E2 419 aaKnown RBP13.9□□□□□ -0.18
SNF8-206ENST00000509989 KNL1Q8NG31 2342 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 ANKRD62A6NC57 917 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 CBX4O00257 560 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 ATP9BO43861 1147 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 BNIP3LO60238 219 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 RHOBTB1O94844 696 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 TPM3P06753 285 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 C7P10643 843 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 L1CAMP32004 1257 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 PSMD8P48556 350 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 ZNF33AQ06730 810 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 ELF2Q15723 593 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 SMTNL2Q2TAL5 461 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 ATP13A4Q4VNC1 1196 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 EFHC2Q5JST6 749 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 PRR23CQ6ZRP0 262 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 METTL3Q86U44 580 aaKnown RBP13.89□□□□□ -0.19
SNF8-206ENST00000509989 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
SNF8-206ENST00000509989 RMDN1Q96DB5 314 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 IQCDQ96DY2 449 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 SPACA7Q96KW9 195 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 HSPA12BQ96MM6 686 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 ACE2Q9BYF1 805 aaPredicted RBP13.89□□□□□ -0.19
SNF8-206ENST00000509989 DHX35Q9H5Z1 703 aaKnown RBP13.89□□□□□ -0.19
SNF8-206ENST00000509989 C6orf106Q9H6K1 298 aaPredicted RBP13.89□□□□□ -0.19
SNF8-206ENST00000509989 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
SNF8-206ENST00000509989 ATP13A1Q9HD20 1204 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 OSGEPQ9NPF4 335 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 SUN2Q9UH99 717 aa13.89□□□□□ -0.19
SNF8-206ENST00000509989 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
SNF8-206ENST00000509989 DNAH14Q0VDD8 3507 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 EDDM13A0A1B0GTR0 161 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 A0A1W2PP55 124 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 ILVBLA1L0T0 632 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 IGLV3-19P01714 112 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 MYBL1P10243 752 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 GOT1P17174 413 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 EPHB2P29323 1055 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 CD6P30203 668 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 GKP32189 559 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 TAS2R40P59535 323 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 MTA1Q13330 715 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 TRIM14Q14142 442 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 CST6Q15828 149 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 CSRP2Q16527 193 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 SLC18A3Q16572 532 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 ZNF776Q68DI1 518 aaPredicted RBP13.88□□□□□ -0.19
SNF8-206ENST00000509989 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 DCAF4L2Q8NA75 395 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 KDM1BQ8NB78 822 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 FNIP1Q8TF40 1166 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 CELF6Q96J87 481 aaKnown RBP13.88□□□□□ -0.19
SNF8-206ENST00000509989 LOXL4Q96JB6 756 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
SNF8-206ENST00000509989 ZWILCHQ9H900 591 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 ETNK2Q9NVF9 386 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 SLC25A13Q9UJS0 675 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 ANAPC7Q9UJX3 599 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 HS3ST2Q9Y278 367 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 SCINQ9Y6U3 715 aa13.88□□□□□ -0.19
SNF8-206ENST00000509989 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
SNF8-206ENST00000509989 CACNA1EQ15878 2313 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 LRRK1Q38SD2 2015 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 TARSL2A2RTX5 802 aaKnown RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 AKR1B15C9JRZ8 316 aaPredicted RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 ZNF217O75362 1048 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 ZNF806P0C7X5 589 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 SLC8A1P32418 973 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 DRD3P35462 400 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 IRX4P78413 519 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 SLC25A11Q02978 314 aaKnown RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 RSPO4Q2I0M5 234 aaPredicted RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 PPP6R3Q5H9R7 873 aaPredicted RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 ERMARDQ5T6L9 678 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 LYSMD4Q5XG99 296 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 IL31Q6EBC2 164 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 PPP1R2P3Q6NXS1 205 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 ARHGAP36Q6ZRI8 547 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 CYP2U1Q7Z449 544 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 NPWQ8N729 165 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 RTL3Q8N8U3 475 aaKnown RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 ATP11CQ8NB49 1132 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 OR2A12Q8NGT7 310 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 OR2I1PQ8NGU4 316 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 TRIM11Q96F44 468 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 HMCESQ96FZ2 354 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms