RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TMEM9BQ9NQ34 198 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 PRSS16Q9NQE7 514 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ITM2CQ9NQX7 267 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 TMEM74BQ9NUR3 256 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 PARVAQ9NVD7 372 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ANAPC7Q9UJX3 599 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 INTS6Q9UL03 887 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 FZD10Q9ULW2 581 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ERVW-1Q9UQF0 538 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 NCKAP1Q9Y2A7 1128 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 MFHAS1Q9Y4C4 1052 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 HYOU1Q9Y4L1 999 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 PCDHA13Q9Y5I0 950 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 EPN1Q9Y6I3 576 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 DCHS1Q96JQ0 3298 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ABCA7Q8IZY2 2146 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 DNAH14Q0VDD8 3507 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 IGLV3-10A0A075B6K4 115 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 A0A1B0GVM2 712 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 LNP1A1A4G5 178 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 TCAF2A6NFQ2 919 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SRPRAP08240 638 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 CD48P09326 243 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 TPM1P09493 284 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 H2AFZP0C0S5 128 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 MYBL1P10243 752 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 PSMA2P25787 234 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 MAOBP27338 520 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SDC4P31431 198 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 ADRA1BP35368 520 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 HOXD12P35452 270 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 ARHGAP25P42331 645 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 CTSOP43234 321 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 MARCKSL1P49006 195 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 ARSEP51690 589 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 COPAP53621 1224 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 LIMK1P53667 647 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SCAPQ12770 1279 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SFSWAPQ12872 951 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 CAMK2GQ13555 558 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SLC12A1Q13621 1099 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 TCEAL1Q15170 157 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 PLEKHG6Q3KR16 790 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 ACCSLQ4AC99 568 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 PPM1JQ5JR12 505 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 BRMS1LQ5PSV4 323 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNF776Q68DI1 518 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 CXorf57Q6NSI4 855 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 H2AFVQ71UI9 128 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 KIAA0907Q7Z7F0 614 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 NLRP14Q86W24 1093 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 TMTC1Q8IUR5 882 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 TP53INP2Q8IXH6 220 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 CCDC170Q8IYT3 715 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 APCDD1Q8J025 514 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 NIPA2Q8N8Q9 360 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 NETO2Q8NC67 525 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 ALG14Q96F25 216 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 RPL10LQ96L21 214 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 KCTD15Q96SI1 283 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SNRNP25Q9BV90 132 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 MUC3BQ9H195 1237 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 MTG2Q9H4K7 406 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 NOL6Q9H6R4 1146 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 TMEM51Q9NW97 253 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNHIT6Q9NWK9 470 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 WSB2Q9NYS7 404 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 MPP6Q9NZW5 540 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 USP36Q9P275 1121 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SUSD2Q9UGT4 822 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 PCSK1NQ9UHG2 260 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 EVLQ9UI08 416 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SLC25A13Q9UJS0 675 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 VPS28Q9UK41 221 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 PILRBQ9UKJ0 227 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 SLC6A14Q9UN76 642 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 LAMA1P25391 3075 aa8.98□□□□□ -0.97
PDLIM5-213ENST00000509357 EDDM13A0A1B0GTR0 161 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 MED19A0JLT2 244 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 FAM47DPA6NHR8 397 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 TTC34A8MYJ7 566 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 E9PAM4 449 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 PJA2O43164 708 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SRGAP2O75044 1071 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SIN3BO75182 1162 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 CLDN11O75508 207 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 LRIG2O94898 1065 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 RHOCP08134 193 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SYPP08247 313 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SERPINF2P08697 491 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 ENGP17813 658 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 IL4RP24394 825 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 MZF1P28698 734 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 MAGEA1P43355 309 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 RPS14P62263 151 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 ZBTB16Q05516 673 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SULT2A1Q06520 285 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SMTNL2Q2TAL5 461 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 HNRNPA1L2Q32P51 320 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 KCNT1Q5JUK3 1230 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms