RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 AASSQ9UDR5 926 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 HERC5Q9UII4 1024 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ACAD8Q9UKU7 415 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 GPR34Q9UPC5 381 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 KIF26BQ2KJY2 2108 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 NOTCH3Q9UM47 2321 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 KAT6BQ8WYB5 2073 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 CLCA1A8K7I4 914 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 PODXLO00592 558 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 NPC1O15118 1278 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 USP12O75317 370 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 TBCAO75347 108 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 TMEM63AO94886 807 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 WDR47O94967 919 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 RTN3O95197 1032 aaPredicted RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 STARD3NLO95772 234 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 SYF2O95926 243 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 APOA4P06727 396 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 TFEBP19484 476 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 FGFR2P21802 821 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 CNTFP26441 200 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 AARSP49588 968 aaKnown RBP eCLIP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 MCM2P49736 904 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 DRG2P55039 364 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 DCAF7P61962 342 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 UBE3AQ05086 875 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 MTA1Q13330 715 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 GAB1Q13480 694 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 CUL4AQ13619 759 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 DCTN1Q14203 1278 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 KCNJ12Q14500 433 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 SMC1AQ14683 1233 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 TAF5Q15542 800 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 C1QTNF12Q5T7M4 302 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 NUGGCQ68CJ6 796 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 TANGO2Q6ICL3 276 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 B4GALNT4Q76KP1 1039 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 RBM23Q86U06 439 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 SESTD1Q86VW0 696 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 TMTC1Q8IUR5 882 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 YAF2Q8IY57 180 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 FTSJ3Q8IY81 847 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 CCAR2Q8N163 923 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 FAM71BQ8TC56 605 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 THAP4Q8WY91 577 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 PIGKQ92643 395 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 EID2BQ96D98 161 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 CDHR1Q96JP9 859 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 WDR24Q96S15 920 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 MPHOSPH8Q99549 860 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 BARD1Q99728 777 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 CHCHD6Q9BRQ6 235 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 PIMREGQ9BSJ6 248 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 SORBS1Q9BX66 1292 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 RNF26Q9BY78 433 aaPredicted RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZCWPW1Q9H0M4 648 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 NOD2Q9HC29 1040 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 THSD1Q9NS62 852 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 ANKEF1Q9NU02 776 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 ABHD10Q9NUJ1 306 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 GRHPRQ9UBQ7 328 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 ISY1Q9ULR0 285 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 PCDHA7Q9UN72 937 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARHGAP26Q9UNA1 814 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 HPSEQ9Y251 543 aa2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 TDRD9Q8NDG6 1382 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-204ENST00000509006 WDR81Q562E7 1941 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 KIR2DS5A0A0G2JLQ3 304 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 PGPEP1LA6NFU8 196 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 HMX3A6NHT5 357 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 LGALS16A8MUM7 142 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 KIR2DS3K7RE56 304 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 TSPAN3O60637 253 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 CAMTA2O94983 1202 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 TBX18O95935 607 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 SCGB1D1O95968 90 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 PLGP00747 810 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 POLBP06746 335 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 ITGA5P08648 1049 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 HSPA1AP0DMV8 641 aaKnown RBP2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 HSPA1BP0DMV9 641 aaKnown RBP2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 CST5P28325 142 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 NDUFS1P28331 727 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 DUSP1P28562 367 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 OAS2P29728 719 aaKnown RBP2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 CDC25AP30304 524 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 ATICP31939 592 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARL3P36405 182 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 PBX1P40424 430 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 LIFRP42702 1097 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 CARSP49589 748 aaKnown RBP2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZNF84P51523 738 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 ACTR2P61160 394 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 ROR1Q01973 937 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 PPATQ06203 517 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 KRT32Q14532 448 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 PTGR1Q14914 329 aa2.6□□□□□ -1.99
DEPDC1B-204ENST00000509006 ANKRD1Q15327 319 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms