RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 ZSCAN5CA6NGD5 496 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 KCNK1O00180 336 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 MATN3O15232 486 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 PRAMEF11O60813 436 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 OPHN1O60890 802 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 GCATO75600 419 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 GDI1P31150 447 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 CSKP41240 450 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 IFI35P80217 286 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 SLC7A5Q01650 507 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 IL10RBQ08334 325 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 LMAN2Q12907 356 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 NR1H3Q13133 447 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 ERCC6LQ2NKX8 1250 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 P3H1Q32P28 736 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 FSCBQ5H9T9 825 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 C4orf22Q6V702 233 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 ST13P5Q8NFI4 369 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 OR7D4Q8NG98 312 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 MAFAQ8NHW3 353 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 NSMCE1Q8WV22 266 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 MAML1Q92585 1016 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 NXPE3Q969Y0 559 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 SPATA13Q96N96 652 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 ZNF599Q96NL3 588 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 XPO6Q96QU8 1125 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 VAT1Q99536 393 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 ERP44Q9BS26 406 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 FEM1AQ9BSK4 669 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 SPON2Q9BUD6 331 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 ACE2Q9BYF1 805 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 ECT2Q9H8V3 914 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 ANKZF1Q9H8Y5 726 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 HPS4Q9NQG7 708 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 PAK5Q9P286 719 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 DMGDHQ9UI17 866 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 VPS28Q9UK41 221 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 TRHDEQ9UKU6 1024 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 OR51B4Q9Y5P0 310 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 SHROOM3Q8TF72 1996 aa11.13□□□□□ -0.63
POLR2J3-214ENST00000508910 C5orf42Q9H799 3197 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 J3KR12 359 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 CBX4O00257 560 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 NDC80O14777 642 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 KDELR3O43731 214 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 CCNB1P14635 433 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 ETS1P14921 441 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 PTPN3P26045 913 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 MZF1P28698 734 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 CD70P32970 193 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 GUCY2DQ02846 1103 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 TNK2Q07912 1038 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 WASHC5Q12768 1159 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 ZBTB17Q13105 803 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 RUNX3Q13761 415 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 HNRNPDQ14103 355 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 DMC1Q14565 340 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 TRIP13Q15645 432 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 ELF2Q15723 593 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 PLEKHG6Q3KR16 790 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 TMCO4Q5TGY1 634 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 DUPD1Q68J44 220 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 ARHGEF18Q6ZSZ5 1173 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 GPR161Q8N6U8 529 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 GLIS1Q8NBF1 620 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 SEC14L1Q92503 715 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 ALG14Q96F25 216 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 SNF8Q96H20 258 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 LMLNQ96KR4 655 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 BRD9Q9H8M2 597 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 PDFQ9HBH1 243 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 ABCB8Q9NUT2 735 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 DNAJC17Q9NVM6 304 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 KLHL8Q9P2G9 620 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 UBA2Q9UBT2 640 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 GGA2Q9UJY4 613 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 CLEC4EQ9ULY5 219 aa11.12□□□□□ -0.63
POLR2J3-214ENST00000508910 XIRP2A4UGR9 3374 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 CXorf51AA0A1B0GTR3 108 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ARNTLO00327 626 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 NEBLO76041 1014 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 PEX11BO96011 259 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 JCHAINP01591 159 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 TUBBP07437 444 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ZSCAN5DPP0CG00 497 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 PABPC1P11940 636 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 MCM3P25205 808 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 HLA-FP30511 346 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 RPL22P35268 128 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ADCY8P40145 1251 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 DGKGP49619 791 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms