RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 NUP85Q9BW27 656 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 ACE2Q9BYF1 805 aaPredicted RBP18.62■□□□□ 0.57
CLDND1-220ENST00000508902 TRIM5Q9C035 493 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 DNAI1Q9UI46 699 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 AP4E1Q9UPM8 1137 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 SCINQ9Y6U3 715 aa18.62■□□□□ 0.57
CLDND1-220ENST00000508902 PLXNA2O75051 1894 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 EDDM13A0A1B0GTR0 161 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 ANKRD62A6NC57 917 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 GDF9O60383 454 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 ZNF217O75362 1048 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 RHOBTB1O94844 696 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 ITPKAP23677 461 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 DHPSP49366 369 aaPredicted RBP18.61■□□□□ 0.57
CLDND1-220ENST00000508902 OXCT1P55809 520 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 ST8SIA6P61647 398 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 RPL6Q02878 288 aaKnown RBP18.61■□□□□ 0.57
CLDND1-220ENST00000508902 CREB5Q02930 508 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 SULT2A1Q06520 285 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 EFHC2Q5JST6 749 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 C6orf118Q5T5N4 469 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 AADATQ8N5Z0 425 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 RTL3Q8N8U3 475 aaKnown RBP18.61■□□□□ 0.57
CLDND1-220ENST00000508902 ARHGEF2Q92974 986 aaKnown RBP18.61■□□□□ 0.57
CLDND1-220ENST00000508902 SUN2Q9UH99 717 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 SARDHQ9UL12 918 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 SPTBN2O15020 2390 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 KNL1Q8NG31 2342 aa18.61■□□□□ 0.57
CLDND1-220ENST00000508902 TARSL2A2RTX5 802 aaKnown RBP18.6■□□□□ 0.57
CLDND1-220ENST00000508902 MID1O15344 667 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 CREB3O43889 395 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 LRP3O75074 770 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 CTSLP07711 333 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 CD6P30203 668 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 ACSL1P33121 698 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 SLC25A11Q02978 314 aaKnown RBP18.6■□□□□ 0.57
CLDND1-220ENST00000508902 E2F5Q15329 346 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 DLG2Q15700 870 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 CSRP2Q16527 193 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 PEAR1Q5VY43 1037 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-220ENST00000508902 ZNF776Q68DI1 518 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-220ENST00000508902 PRR23CQ6ZRP0 262 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 LPCAT2Q7L5N7 544 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 FAM124AQ86V42 546 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 C11orf74Q86VG3 221 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 MMAAQ8IVH4 418 aaKnown RBP18.6■□□□□ 0.57
CLDND1-220ENST00000508902 NIPA2Q8N8Q9 360 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 NETO2Q8NC67 525 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 NHEJ1Q9H9Q4 299 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-220ENST00000508902 ANAPC7Q9UJX3 599 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 USP18Q9UMW8 372 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 MFHAS1Q9Y4C4 1052 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 PCDHGA5Q9Y5G8 931 aa18.6■□□□□ 0.57
CLDND1-220ENST00000508902 WASH4PA8MWX3 477 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 AKR1B15C9JRZ8 316 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-220ENST00000508902 PLK4O00444 970 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 EPHB2P29323 1055 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 DRD3P35462 400 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 MAPKAPK2P49137 400 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 AIF1P55008 147 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 CST6Q15828 149 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 ZNF783Q6ZMS7 281 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 VPS36Q86VN1 386 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 TP53INP2Q8IXH6 220 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 CHST14Q8NCH0 376 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 ZNF419Q96HQ0 510 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-220ENST00000508902 HSPA12BQ96MM6 686 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 SPON2Q9BUD6 331 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 GPR174Q9BXC1 333 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 PABPC3Q9H361 631 aaKnown RBP18.59■□□□□ 0.57
CLDND1-220ENST00000508902 DHX35Q9H5Z1 703 aaKnown RBP18.59■□□□□ 0.57
CLDND1-220ENST00000508902 FBRSQ9HAH7 460 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 ATP13A1Q9HD20 1204 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 OSGEPQ9NPF4 335 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 FSCN3Q9NQT6 498 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 SLC25A13Q9UJS0 675 aa18.59■□□□□ 0.57
CLDND1-220ENST00000508902 CNOT1A5YKK6 2376 aaKnown RBP18.59■□□□□ 0.57
CLDND1-220ENST00000508902 CBX4O00257 560 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 ZNF806P0C7X5 589 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 GOT1P17174 413 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 PCK1P35558 622 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 PSMD8P48556 350 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 ZNF33AQ06730 810 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 SMTNL2Q2TAL5 461 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 KCNT1Q5JUK3 1230 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 ERMARDQ5T6L9 678 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 LYSMD4Q5XG99 296 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 C22orf39Q6P5X5 142 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 SLC36A4Q6YBV0 504 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 LEKR1Q6ZMV7 388 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 CYP2U1Q7Z449 544 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 NPWQ8N729 165 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 OR2A12Q8NGT7 310 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 FAM131CQ96AQ9 280 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 RMDN1Q96DB5 314 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 HMCESQ96FZ2 354 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 MRFAP1L1Q96HT8 127 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 C2orf49Q9BVC5 232 aaPredicted RBP18.58■□□□□ 0.56
CLDND1-220ENST00000508902 TNKS2Q9H2K2 1166 aa18.58■□□□□ 0.56
CLDND1-220ENST00000508902 C6orf106Q9H6K1 298 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms