RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 VAT1Q99536 393 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SENP6Q9GZR1 1112 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PIF1Q9H611 641 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 RERGLQ9H628 205 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 CLN6Q9NWW5 311 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 DDX43Q9NXZ2 648 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC17A7Q9P2U7 560 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PHF11Q9UIL8 331 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 BARX2Q9UMQ3 279 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PCDHB8Q9UN66 801 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SNX7Q9UNH6 387 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 WASF2Q9Y6W5 498 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 POLRMTO00411 1230 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 TBX10O75333 385 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 EIF4BP23588 611 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 RPL22P35268 128 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 BCAP31P51572 246 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 MOGQ16653 247 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM187BQ17R55 369 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PGS1Q32NB8 556 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SV2CQ496J9 727 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 MTX3Q5HYI7 312 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 UBE2Q1Q7Z7E8 422 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 ZSWIM2Q8NEG5 633 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 BTN2A2Q8WVV5 523 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 C10orf82Q8WW14 230 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC44A1Q8WWI5 657 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 CELF1Q92879 486 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SH3KBP1Q96B97 665 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 EPB41L4BQ9H329 900 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 NOL11Q9H8H0 719 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 CD320Q9NPF0 282 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PRMT7Q9NVM4 692 aaPredicted RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 TBC1D30Q9Y2I9 924 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 OVOS2A0A0J9YW53 1432 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 OVOS2Q6IE36 1432 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 RNF225M0QZC1 329 aaPredicted RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 OGTO15294 1046 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SSNA1O43805 119 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PMPCBO75439 489 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PARNO95453 639 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 GLP2RO95838 553 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC2A4P14672 509 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 CHI3L1P36222 383 aaPredicted RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PNPLA4P41247 253 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 GRIA4P48058 902 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SCN1BQ07699 218 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SYTL3Q4VX76 610 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 RFWD3Q6PCD5 774 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 POLNQ7Z5Q5 900 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 DPP9Q86TI2 863 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF606Q8WXB4 792 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 C8orf37Q96NL8 207 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 TSPAN18Q96SJ8 248 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 APOL5Q9BWW9 433 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SPATA7Q9P0W8 599 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 CLEC11AQ9Y240 323 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 INVSQ9Y283 1065 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 NDUFB10O96000 172 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 ZSCAN5DPP0CG00 497 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 CYP19A1P11511 503 aaPredicted RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 TGFBR2P37173 567 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PPP4CP60510 307 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PRKCEQ02156 737 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 TKFCQ3LXA3 575 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SPESP1Q6UW49 350 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 FASTKD5Q7L8L6 764 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 HIPK1Q86Z02 1210 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 DSELQ8IZU8 1212 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 DPP10Q8N608 796 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PACRGLQ8N7B6 248 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SPPL2AQ8TCT8 520 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 URGCPQ8TCY9 931 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 KAZALD1Q96I82 304 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 DNAJC1Q96KC8 554 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SYT15Q9BQS2 421 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 KATNAL1Q9BW62 490 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 OSBPL10Q9BXB5 764 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 RIOX1Q9H6W3 641 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 LRRC4CQ9HCJ2 640 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 C12orf4Q9NQ89 552 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF224Q9NZL3 707 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 TMEM9Q9P0T7 183 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 IKZF3Q9UKT9 509 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SSR3Q9UNL2 185 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 PLA2G4CQ9UP65 541 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 ERGIC3Q9Y282 383 aa7.42□□□□□ -1.22
UBE2D3-224ENST00000508474 SYNDIG1LA6NDD5 238 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CABYRO75952 493 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CRTAMO95727 393 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 S100A6P06703 90 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 GPIP06744 558 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ATF4P18848 351 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CAPGP40121 348 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PPP3CCP48454 512 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF135P52742 658 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PSMD5Q16401 504 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ZRANB3Q5FWF4 1079 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 EMC10Q5UCC4 262 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms