RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 SEM1Q6ZVN7 128 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 RNF44Q7L0R7 432 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 LRRC8DQ7L1W4 858 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 MIER3Q7Z3K6 550 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 SZRD1Q7Z422 152 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 RAB11FIP4Q86YS3 637 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 RFX6Q8HWS3 928 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 PEX5LQ8IYB4 626 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 LNX2Q8N448 690 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 TTC39CQ8N584 583 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 PPM1NQ8N819 430 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 GMCL1P1Q8NEA9 526 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 IPMKQ8NFU5 416 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 SCFD2Q8WU76 684 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 EID2BQ96D98 161 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 RNF125Q96EQ8 232 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 GIMAP5Q96F15 307 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 NRBF2Q96F24 287 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 MSLNLQ96KJ4 702 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 CNOT6LQ96LI5 555 aaKnown RBP3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 ZNF778Q96MU6 729 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 ATP6V0BQ99437 205 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 PRPF18Q99633 342 aaKnown RBP3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 ACE2Q9BYF1 805 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 TAF1DQ9H5J8 278 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 FANCEQ9HB96 536 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 TMEM8AQ9HCN3 771 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 IL1RAPL2Q9NP60 686 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 ZBTB40Q9NUA8 1239 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 ANO10Q9NW15 660 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 HCFC1R1Q9NWW0 138 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 NMRK1Q9NWW6 199 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 QPCTLQ9NXS2 382 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 TAS2R10Q9NYW0 307 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 HSFX1Q9UBD0 423 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 AFF4Q9UHB7 1163 aaKnown RBP3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 IL19Q9UHD0 177 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 SCOCQ9UIL1 159 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 FEM1BQ9UK73 627 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 RUVBL1Q9Y265 456 aaKnown RBP3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 CCL27Q9Y4X3 112 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 NR2E3Q9Y5X4 410 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 CYP46A1Q9Y6A2 500 aa3.78□□□□□ -1.8
HMGB3P15-201ENST00000507326 TTC21BQ7Z4L5 1316 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CENPJQ9HC77 1338 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 SYCE3A1L190 88 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TISP43B9A030 160 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 B9A039 149 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 H0YAE9 185 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 H3BUI4 141 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 UBE2CO00762 179 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 SPTLC2O15270 562 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 BUB1O43683 1085 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TBC1D4O60343 1298 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 RTN2O75298 545 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 FAM155BO75949 473 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 KRT38O76015 456 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TRIM16O95361 564 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TK1P04183 234 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 ANXA2P07355 339 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 ITGA5P08648 1049 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 ZNF853P0CG23 659 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 PDHBP11177 359 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 LAMP2P13473 410 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 FDPSP14324 419 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 PCSK1P29120 753 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 ATP5OP48047 213 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 MTNR1BP49286 362 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 HDAC4P56524 1084 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 NOMO3P69849 1222 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 RPP30P78346 268 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 COG7P83436 770 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 MECOMQ03112 1051 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 ACTN3Q08043 901 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 PPP3CAQ08209 521 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 RIPK1Q13546 671 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 MXD4Q14582 209 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CNGA3Q16281 694 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 KBTBD12Q3ZCT8 623 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 DUSP28Q4G0W2 176 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 BOLA3Q53S33 107 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 NOMO2Q5JPE7 1267 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 KCNT1Q5JUK3 1230 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 SNX30Q5VWJ9 437 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 ATG16L1Q676U5 607 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 SULT6B1Q6IMI4 303 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 KLC3Q6P597 504 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CATSPERGQ6ZRH7 1159 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 C15orf52Q6ZUT6 534 aaKnown RBP3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CCDC80Q76M96 950 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 RAB11FIP2Q7L804 512 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TAF8Q7Z7C8 310 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 HOOK3Q86VS8 718 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TMEM200AQ86VY9 491 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CPOQ8IVL8 374 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 TUSC5Q8IXB3 177 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 POGLUT1Q8NBL1 392 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 OR52K1Q8NGK4 314 aa3.77□□□□□ -1.81
HMGB3P15-201ENST00000507326 CYP2W1Q8TAV3 490 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms