RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 STRADAQ7RTN6 431 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 HDDC3Q8N4P3 179 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 DCAF4L2Q8NA75 395 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 OR2T34Q8NGX1 318 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 RXFP2Q8WXD0 754 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC32A1Q9H598 525 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 TM9SF3Q9HD45 589 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 MPP6Q9NZW5 540 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 PPARGC1AQ9UBK2 798 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 VPS51Q9UID3 782 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC25A13Q9UJS0 675 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 VPS28Q9UK41 221 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 ANGPTL2Q9UKU9 493 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 MYO6Q9UM54 1294 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 NEU3Q9UQ49 428 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 NCKAP1Q9Y2A7 1128 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 CHD5Q8TDI0 1954 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 KMT2BQ9UMN6 2715 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 CACNA1BQ00975 2339 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 PLXNA2O75051 1894 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 A0A0D9SEW6 157 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 A0A1B0GVT2 93 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 A0A1W2PPC4 97 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ILVBLA1L0T0 632 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 LRRC72A6NJI9 287 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 MCF2LO15068 1137 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 SNAP91O60641 907 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 RNASEH2AO75792 299 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ZMPSTE24O75844 475 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 FSBPO95073 299 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 GJB6O95452 261 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 CER1O95813 267 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 MT-CO1P00395 513 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 CALB1P05937 261 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 RHOCP08134 193 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 GOT1P17174 413 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 SDC4P31431 198 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 RFC1P35251 1148 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ADRA1BP35368 520 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 NSFP46459 744 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 CSNK1EP49674 416 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 CCR5P51681 352 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 METAP1P53582 386 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ADPRHP54922 357 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 HDAC4P56524 1084 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM193AP78312 1265 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 KRT83P78385 493 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ATP11AP98196 1134 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 HNRNPDQ14103 355 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 DSG2Q14126 1118 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 C6orf118Q5T5N4 469 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 CAVIN1Q6NZI2 390 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 IL27RAQ6UWB1 636 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF783Q6ZMS7 281 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 DBX2Q6ZNG2 339 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 Q6ZVU0 165 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 IRF2BP2Q7Z5L9 587 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 TFAP2DQ7Z6R9 452 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 PHLDB2Q86SQ0 1253 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 C3orf20Q8ND61 904 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 GANCQ8TET4 914 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 OR8D1Q8WZ84 308 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 SNX19Q92543 992 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 BAP1Q92560 729 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 AGPAT1Q99943 283 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 OMDQ99983 421 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ZYG11BQ9C0D3 744 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 NAT10Q9H0A0 1025 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 MUC3BQ9H195 1237 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 OSBPL2Q9H1P3 480 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 RETREG1Q9H6L5 497 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 EBF2Q9HAK2 575 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 IL21RQ9HBE5 538 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 ADAM22Q9P0K1 906 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 SARDHQ9UL12 918 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 PPM1HQ9ULR3 514 aa9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 TPX2Q9ULW0 747 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-209ENST00000506632 CXorf51AA0A1B0GTR3 108 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 A0A1W2PQC6 194 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 SIGLEC16A6NMB1 481 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 SMTNL1A8MU46 457 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 K7ERQ8 282 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC7A4O43246 635 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 SMAD6O43541 496 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 LATO43561 262 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 SH3BP5O60239 455 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 SRGAP2O75044 1071 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 IL1BP01584 269 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 CTSLP07711 333 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 KRT3P12035 628 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 FERP16591 822 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 GLDCP23378 1020 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 OR1E1P30953 314 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 CTSKP43235 329 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF165P49910 485 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 CLCN6P51797 869 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms