RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 WASH4PA8MWX3 477 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 CBX4O00257 560 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 EEF2KO00418 725 aaKnown RBP17.08■□□□□ 0.32
SNCA-209ENST00000506244 NDUFS2O75306 463 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 IGLV3-19P01714 112 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 BCKDHBP21953 392 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 CD6P30203 668 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 CDC25BP30305 580 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 RPL6Q02878 288 aaKnown RBP17.08■□□□□ 0.32
SNCA-209ENST00000506244 SLC20A2Q08357 652 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 HADHQ16836 314 aaKnown RBP17.08■□□□□ 0.32
SNCA-209ENST00000506244 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 BOLA3Q53S33 107 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 IL31Q6EBC2 164 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 RHOT2Q8IXI1 618 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 ARFGAP1Q8N6T3 406 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 ATP11CQ8NB49 1132 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 OR7D4Q8NG98 312 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 TEKT4Q8WW24 435 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 OR8D1Q8WZ84 308 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 SPON2Q9BUD6 331 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 ZWILCHQ9H900 591 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 ITM2CQ9NQX7 267 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 GPATCH2LQ9NWQ4 482 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 DNAI1Q9UI46 699 aa17.08■□□□□ 0.32
SNCA-209ENST00000506244 FARP1Q9Y4F1 1045 aaPredicted RBP17.08■□□□□ 0.32
SNCA-209ENST00000506244 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 ALOX15BO15296 676 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 DAPK3O43293 454 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 SNAP91O60641 907 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 IPO7O95373 1038 aaKnown RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 ADH1BP00325 375 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 SRCP12931 536 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 CYLC1P35663 651 aaPredicted RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 ARL4AP40617 200 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 NUMBP49757 651 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 TPMTP51580 245 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 YBEYP58557 167 aaPredicted RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 RPS14P62263 151 aaKnown RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 POLD3Q15054 466 aaPredicted RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 PARP15Q460N3 678 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 PPP6R3Q5H9R7 873 aaPredicted RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 C9orf64Q5T6V5 341 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 CYP2U1Q7Z449 544 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 FRS2Q8WU20 508 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 RFFLQ8WZ73 363 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 FOXJ1Q92949 421 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 PACSIN1Q9BY11 444 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 CEP44Q9C0F1 390 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 MBD1Q9UIS9 605 aaPredicted RBP17.07■□□□□ 0.32
SNCA-209ENST00000506244 USP34Q70CQ2 3546 aa17.07■□□□□ 0.32
SNCA-209ENST00000506244 H3BRJ5 948 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 MAN1A1P33908 653 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 SSR1P43307 286 aaKnown RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 RECQLP46063 649 aaPredicted RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 DHPSP49366 369 aaPredicted RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 SERPINH1P50454 418 aaKnown RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 SPA17Q15506 151 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 DLG2Q15700 870 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 CST6Q15828 149 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 DPYSL2Q16555 572 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 LYSMD4Q5XG99 296 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 RFX8Q6ZV50 586 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 CYP4V2Q6ZWL3 525 aaPredicted RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 USP30Q70CQ3 517 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 ZNF354CQ86Y25 554 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 PTPRN2Q92932 1015 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 ARHGEF2Q92974 986 aaKnown RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 KCTD15Q96SI1 283 aaPredicted RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 ACE2Q9BYF1 805 aaPredicted RBP17.06■□□□□ 0.32
SNCA-209ENST00000506244 PCED1AQ9H1Q7 454 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNCA-209ENST00000506244 NDFIP2Q9NV92 336 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 IMPACTQ9P2X3 320 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 NCKAP1Q9Y2A7 1128 aa17.06■□□□□ 0.32
SNCA-209ENST00000506244 EP300Q09472 2414 aaPredicted RBP17.05■□□□□ 0.32
SNCA-209ENST00000506244 GVINP1Q7Z2Y8 2422 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 C1QTNF3-AMACRE9PGA6 284 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 PROSCO94903 275 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 HOXD12P35452 270 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 MPLP40238 635 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 PSMD8P48556 350 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 HCAR3P49019 387 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 CREB5Q02930 508 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 SLC25A11Q02978 314 aaKnown RBP17.05■□□□□ 0.32
SNCA-209ENST00000506244 CA9Q16790 459 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 SMTNL2Q2TAL5 461 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 FAM46CQ5VWP2 391 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 C22orf39Q6P5X5 142 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 Q6ZVU0 165 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 RABEPKQ7Z6M1 372 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 TMTC1Q8IUR5 882 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 UMODL1-AS1Q8N2C9 162 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 STK40Q8N2I9 435 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 HSPH1Q92598 858 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 TOE1Q96GM8 510 aaKnown RBP17.05■□□□□ 0.32
SNCA-209ENST00000506244 BTBD6Q96KE9 485 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 MAGEB5Q9BZ81 275 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms