RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 DENND1AQ8TEH3 1009 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 NCSTNQ92542 709 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 HVCN1Q96D96 273 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 EIF2AK1Q9BQI3 630 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 GPR63Q9BZJ6 419 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 HIPK3Q9H422 1215 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 SPAG4Q9NPE6 437 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 THSD1Q9NS62 852 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 MSRB1Q9NZV6 116 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 HDAC6Q9UBN7 1215 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 HEY2Q9UBP5 337 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 UPB1Q9UBR1 384 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 COG5Q9UP83 839 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 AFG3L2Q9Y4W6 797 aa4.4□□□□□ -1.71
TOPBP1-204ENST00000505804 PCSK5Q92824 1860 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 TARSL2A2RTX5 802 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 SH2D7A6NKC9 451 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF814B7Z6K7 855 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 EYA2O00167 538 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 HOXC11O43248 304 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 CBX6O95503 412 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 FGBP02675 491 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 CHRNB1P11230 501 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 PRF1P14222 555 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 CD72P21854 359 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 PRKCHP24723 683 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 PTPN9P43378 593 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 TUBP50607 506 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 TRPC3Q13507 836 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 C5orf22Q49AR2 442 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 FBXO43Q4G163 708 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 ENTPD8Q5MY95 495 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 AADACL2Q6P093 401 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 AAGABQ6PD74 315 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 ESX1Q8N693 406 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 MSI2Q96DH6 328 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF419Q96HQ0 510 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 CLMNQ96JQ2 1002 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 ZFYVE19Q96K21 471 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 TAOK3Q9H2K8 898 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 PDP2Q9P2J9 529 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 SUFUQ9UMX1 484 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 ICKQ9UPZ9 632 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 CRYL1Q9Y2S2 319 aa4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF335Q9H4Z2 1342 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-204ENST00000505804 A0A0G2JK05 382 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 TMEM247A6NEH6 219 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 FAM90A7PA6NKC0 464 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 A6NNC1 897 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 FAM90A22PA8MWA6 464 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 FAM90A12PA8MX19 464 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 FAM90A23PA8MXZ1 464 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 STRNO43815 780 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 LCKP06239 509 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC16A2P36021 539 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 GJC1P36383 396 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 PGM1P36871 562 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 GAD2Q05329 585 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 TBL3Q12788 808 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 MAPK7Q13164 816 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 TDGQ13569 410 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 ALG10Q5BKT4 473 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 ALG10BQ5I7T1 473 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 C6orf10Q5SRN2 563 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 UBAP2Q5T6F2 1119 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 PXDC1Q5TGL8 231 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 TMEM268Q5VZI3 342 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 TTLL5Q6EMB2 1281 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 C11orf87Q6NUJ2 197 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 PIP4P1Q86T03 277 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 IGFN1Q86VF2 1251 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 SETD9Q8NE22 299 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 CMASQ8NFW8 434 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 PIGOQ8TEQ8 1089 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 HTRA1Q92743 480 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 TBATAQ96M53 351 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF778Q96MU6 729 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 CLSTN3Q9BQT9 956 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 WDR83Q9BRX9 315 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 PHF7Q9BWX1 381 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 NPLQ9BXD5 320 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 MROH8Q9H579 483 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 TTC12Q9H892 705 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 NLKQ9UBE8 527 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF70Q9UC06 446 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 GJD2Q9UKL4 321 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 HSF4Q9ULV5 492 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
TOPBP1-204ENST00000505804 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 TRBV5-7A0A0A0MS05 114 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 OR6C68A6NDL8 312 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 PPEF2O14830 753 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ATG13O75143 517 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 DDAH2O95865 285 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 XBP1P17861 261 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 SKIV2L2P42285 1042 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ME1P48163 572 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF81P51508 661 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms