RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 CASS4Q9NQ75 786 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 MPP6Q9NZW5 540 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 THEGQ9P2T0 379 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 PSMC3IPQ9P2W1 217 aaPredicted RBP8.23□□□□□ -1.09
COL4A5-208ENST00000505728 IPO11Q9UI26 975 aaKnown RBP8.23□□□□□ -1.09
COL4A5-208ENST00000505728 VANGL2Q9ULK5 521 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 LZTS1Q9Y250 596 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 AAR2Q9Y312 384 aaKnown RBP8.23□□□□□ -1.09
COL4A5-208ENST00000505728 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 INSL5Q9Y5Q6 135 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 SLC4A7Q9Y6M7 1214 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 MYO7AQ13402 2215 aa8.23□□□□□ -1.09
COL4A5-208ENST00000505728 CHD5Q8TDI0 1954 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 KIAA1671Q9BY89 1806 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 IQANK1A0A1B0GTG1 560 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 EPOPA6NHQ4 379 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RASA4BC9J798 803 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RFXAPO00287 272 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RASA4O43374 803 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 COCHO43405 550 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 NEBLO76041 1014 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ARHGEF15O94989 841 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 LATS1O95835 1130 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 C1RP00736 705 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 OAS1P00973 400 aaKnown RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 F11P03951 625 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 LINC00271P0C7V0 271 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 NFKB1P19838 968 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 BMPR1AP36894 532 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RENBPP51606 427 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 KCNQ1P51787 676 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 SLC18A1P54219 525 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 GEMP55040 296 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 GUCY1A3Q02108 690 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 TNK2Q07912 1038 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 TWF1Q12792 350 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ZBTB17Q13105 803 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 HNRNPDQ14103 355 aaKnown RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 FRG1Q14331 258 aaKnown RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 TMED2Q15363 201 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 PARP15Q460N3 678 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 GLIPR1L2Q4G1C9 344 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RABGAP1LQ5R372 815 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 SYCP2LQ5T4T6 812 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 LGSNQ5TDP6 509 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ARMC3Q5W041 872 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 PPP2R2DQ66LE6 453 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 NADSYN1Q6IA69 706 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ZNF449Q6P9G9 518 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 LILRA6Q6PI73 481 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 UNC5AQ6ZN44 842 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 CAPN12Q6ZSI9 719 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ZNF771Q7L3S4 317 aaPredicted RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RTL10Q7L3V2 364 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 TRABD2AQ86V40 505 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 CHSY1Q86X52 802 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 HERC6Q8IVU3 1022 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 LGI2Q8N0V4 545 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 AGGF1Q8N302 714 aaeCLIP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 CNTD1Q8N815 330 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 KLHL23Q8NBE8 558 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 GSDMBQ8TAX9 411 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 NSMCE1Q8WV22 266 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 SLC44A1Q8WWI5 657 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ATXN2LQ8WWM7 1075 aaKnown RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 IGSF8Q969P0 613 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 STAMBPL1Q96FJ0 436 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RPRD1AQ96P16 312 aaPredicted RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 AGAP3Q96P47 875 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 PAFAH2Q99487 392 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 SELENOSQ9BQE4 189 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 NOL6Q9H6R4 1146 aaKnown RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 LRRC40Q9H9A6 602 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 GLOD4Q9HC38 313 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 SSU72Q9NP77 194 aaKnown RBP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 NDFIP2Q9NV92 336 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RBM22Q9NW64 420 aaKnown RBP eCLIP8.22□□□□□ -1.09
COL4A5-208ENST00000505728 BFARQ9NZS9 450 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 CTNNAL1Q9UBT7 734 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ZNF212Q9UDV6 495 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ZNF180Q9UJW8 692 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 RWDD3Q9Y3V2 267 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 TTLL3Q9Y4R7 772 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 IRAK3Q9Y616 596 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 MAD1L1Q9Y6D9 718 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 IKBKGQ9Y6K9 419 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 DENND4CQ5VZ89 1909 aa8.22□□□□□ -1.09
COL4A5-208ENST00000505728 ATG2AQ2TAZ0 1938 aa8.21□□□□□ -1.09
COL4A5-208ENST00000505728 GOLGA6L7A0A1B0GV03 622 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 TCRBV9S1A1TA0A576 114 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 FAM159BA6NKW6 160 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 FAM155BO75949 473 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 STC2O76061 302 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 CNTN5O94779 1100 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 ALDH1A2O94788 518 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 ADH1AP07327 375 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 CA3P07451 260 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 INHBAP08476 426 aa8.21□□□□□ -1.1
COL4A5-208ENST00000505728 CNPP09543 421 aaKnown RBP8.21□□□□□ -1.1
COL4A5-208ENST00000505728 BRAFP15056 766 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms