RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 ATP6V0D1P61421 351 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 IFITM2Q01629 132 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 PCSK7Q16549 785 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 EPGNQ6UW88 154 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 SGCDQ92629 289 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 ELMO3Q96BJ8 720 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 ACSF2Q96CM8 615 aaPredicted RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 CNDP1Q96KN2 507 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 ACCSQ96QU6 501 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 TEKT3Q9BXF9 490 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 SEMA6AQ9H2E6 1030 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 GGA3Q9NZ52 723 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 COL2A1P02458 1487 aaPredicted RBP13.52□□□□□ -0.24
LETM1-203ENST00000505551 LOXHD1Q8IVV2 1947 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.24
LETM1-203ENST00000505551 RGSL1A5PLK6 1076 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 C3orf70A6NLC5 250 aaPredicted RBP13.52□□□□□ -0.24
LETM1-203ENST00000505551 RGS13O14921 159 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 JRKO75564 520 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 CLPXO76031 633 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 PROZP22891 400 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 DPP6P42658 865 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 TRAF2Q12933 501 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.24
LETM1-203ENST00000505551 DPYSL3Q14195 570 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 PCLAFQ15004 111 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 PPP6R3Q5H9R7 873 aaPredicted RBP13.52□□□□□ -0.24
LETM1-203ENST00000505551 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 PPP2R2DQ66LE6 453 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 ZC3H7AQ8IWR0 971 aaKnown RBP13.52□□□□□ -0.24
LETM1-203ENST00000505551 SIX6OS1Q8N1H7 587 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 ZNF786Q8N393 782 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 FLCNQ8NFG4 579 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 LILRB4Q8NHJ6 448 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 UHRF1Q96T88 793 aaPredicted RBP13.52□□□□□ -0.24
LETM1-203ENST00000505551 RMDN3Q96TC7 470 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 SLC38A10Q9HBR0 1119 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 POPDC2Q9HBU9 364 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 PARVAQ9NVD7 372 aa13.52□□□□□ -0.24
LETM1-203ENST00000505551 TMEM191CA6NGB0 347 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 A8MU76 341 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 TMEM191BP0C7N4 346 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
LETM1-203ENST00000505551 MYF6P23409 242 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 RPL7AP62424 266 aaKnown RBP13.52□□□□□ -0.25
LETM1-203ENST00000505551 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.25
LETM1-203ENST00000505551 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
LETM1-203ENST00000505551 Q3C1V9 767 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 TTC33Q6PID6 262 aaPredicted RBP13.52□□□□□ -0.25
LETM1-203ENST00000505551 FAM20CQ8IXL6 584 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 TMC2Q8TDI7 906 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 IMPG2Q9BZV3 1241 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 NANOGQ9H9S0 305 aa13.52□□□□□ -0.25
LETM1-203ENST00000505551 DNMT3BQ9UBC3 853 aaKnown RBP13.52□□□□□ -0.25
LETM1-203ENST00000505551 ARIH1Q9Y4X5 557 aaPredicted RBP13.52□□□□□ -0.25
LETM1-203ENST00000505551 C1orf232A0A0U1RR37 186 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 A6NL46 340 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 NOTOA8MTQ0 251 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 TTC34A8MYJ7 566 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 PLIN3O60664 434 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 CFHP08603 1231 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 MAPTP10636 758 aaKnown RBP13.51□□□□□ -0.25
LETM1-203ENST00000505551 CCNA2P20248 432 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 MLLT10P55197 1068 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 ABCE1P61221 599 aaKnown RBP13.51□□□□□ -0.25
LETM1-203ENST00000505551 TSPY1Q01534 308 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 MTMR1Q13613 665 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 TKFCQ3LXA3 575 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 MTX3Q5HYI7 312 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 PPM1LQ5SGD2 360 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 BBS12Q6ZW61 710 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 RP9Q8TA86 221 aaKnown RBP13.51□□□□□ -0.25
LETM1-203ENST00000505551 USP13Q92995 863 aaPredicted RBP13.51□□□□□ -0.25
LETM1-203ENST00000505551 C8orf48Q96LL4 319 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 ZNF347Q96SE7 839 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 HERC2P3Q9BVR0 1158 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 TBC1D22BQ9NU19 505 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 SFMBT1Q9UHJ3 866 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 ARHGEF35A5YM69 484 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 FZD9O00144 591 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 VWA5AO00534 786 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 AVILO75366 819 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 CHEK2O96017 543 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 FGFR3P22607 806 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 IDUAP35475 653 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 ATXN3P54252 364 aaPredicted RBP13.51□□□□□ -0.25
LETM1-203ENST00000505551 RFTN1Q14699 578 aaPredicted RBP13.51□□□□□ -0.25
LETM1-203ENST00000505551 ZNF618Q5T7W0 954 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 MROH9Q5TGP6 573 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 HAUS6Q7Z4H7 955 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 CBWD2Q8IUF1 395 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 RNF148Q8N7C7 305 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 RCN3Q96D15 328 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 CDHR1Q96JP9 859 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms