RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 WASH4PA8MWX3 477 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 BHMG1C9JSJ3 638 aaPredicted RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 RNF103O00237 685 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 LEFTY2O00292 366 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 NCAM2O15394 837 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 MYBL2P10244 700 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 ACTN2P35609 894 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 CLCN6P51797 869 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 NRLP54845 237 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 PPIDQ08752 370 aaKnown RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 CALCOCO2Q13137 446 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 ARTNQ5T4W7 220 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 ADGRF1Q5T601 910 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 IZUMO3Q5VZ72 239 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 Q6ZNB5 142 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 GET4Q7L5D6 327 aaPredicted RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 NLRP14Q86W24 1093 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 LZTR1Q8N653 840 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 HJURPQ8NCD3 748 aaPredicted RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 SH3RF2Q8TEC5 729 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 DEPDC1BQ8WUY9 529 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 HTR3CQ8WXA8 447 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 SEC14L1Q92503 715 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 LRRC45Q96CN5 670 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 KLC2Q9H0B6 622 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 TMEM248Q9NWD8 314 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 DONSONQ9NYP3 566 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 GRHL1Q9NZI5 618 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 WHRNQ9P202 907 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 WNT16Q9UBV4 365 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 ZMYM5Q9UJ78 669 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 CCL26Q9Y258 94 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 NEU2Q9Y3R4 380 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 ZFP37Q9Y6Q3 630 aaPredicted RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 KIF26AQ9ULI4 1882 aaPredicted RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 MIA3Q5JRA6 1907 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 SOBPA7XYQ1 873 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 ZNF189O75820 626 aaPredicted RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 SEC31AO94979 1220 aaKnown RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 PRAMEF12O95522 483 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 SP9P0CG40 484 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 FSHRP23945 695 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 ECHS1P30084 290 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 STIP1P31948 543 aaKnown RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 RPL22P35268 128 aaKnown RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 GARSP41250 739 aaKnown RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 MAPKAPK2P49137 400 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 SGSHP51688 502 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 NDST2P52849 883 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 PLTPP55058 493 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 RPS24P62847 133 aaKnown RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 ZXDBP98169 803 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 C5orf22Q49AR2 442 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 TTC39BQ5VTQ0 682 aaPredicted RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 ARHGEF18Q6ZSZ5 1173 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 CHST9Q7L1S5 443 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 ZNF354CQ86Y25 554 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 ARHGAP12Q8IWW6 846 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 BBS7Q8IWZ6 715 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 CCDC13Q8IYE1 715 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 BBOF1Q8ND07 529 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 ITFG1Q8TB96 612 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 CCDC110Q8TBZ0 833 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 AENQ8WTP8 325 aaKnown RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 USP13Q92995 863 aaPredicted RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 HDAC11Q96DB2 347 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 RTP4Q96DX8 246 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 HMCESQ96FZ2 354 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 CEP41Q9BYV8 373 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 SLC39A8Q9C0K1 460 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 BRD8Q9H0E9 1235 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 NEUROG2Q9H2A3 272 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 USP29Q9HBJ7 922 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 NDFIP2Q9NV92 336 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 IGSF9Q9P2J2 1179 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 STOML2Q9UJZ1 356 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 ZNF510Q9Y2H8 683 aa9.57□□□□□ -0.88
TPM3-218ENST00000505010 MYO18AQ92614 2054 aaKnown RBP9.57□□□□□ -0.88
TPM3-218ENST00000505010 A0A0A0MRY4 1105 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 A0A1B0GVM2 712 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 TCAF2A6NFQ2 919 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 ARHGAP42A6NI28 874 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 RASA4BC9J798 803 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 KCNK1O00180 336 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 DNALI1O14645 258 aaPredicted RBP9.56□□□□□ -0.88
TPM3-218ENST00000505010 NDC80O14777 642 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 RASA4O43374 803 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 NARSO43776 548 aaKnown RBP9.56□□□□□ -0.88
TPM3-218ENST00000505010 GREM1O60565 184 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 RAMP2O60895 175 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 TBL1XO60907 577 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 CLDN11O75508 207 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 PAPLNO95428 1278 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 RHOCP08134 193 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 ITIH2P19823 946 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 OR1E1P30953 314 aa9.56□□□□□ -0.88
TPM3-218ENST00000505010 PAPOLAP51003 745 aaKnown RBP9.56□□□□□ -0.88
TPM3-218ENST00000505010 ITGA8P53708 1063 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms