RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 FAM72AQ5TYM5 149 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 PEAR1Q5VY43 1037 aaPredicted RBP14.61□□□□□ -0.07
HOXC9-202ENST00000504557 FAM72DQ6L9T8 149 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 RABEPKQ7Z6M1 372 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 SETD3Q86TU7 594 aaPredicted RBP14.61□□□□□ -0.07
HOXC9-202ENST00000504557 FAM72BQ86X60 149 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 ZNF354CQ86Y25 554 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 PYROXD2Q8N2H3 581 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 HDDC3Q8N4P3 179 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 KDM1BQ8NB78 822 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 CADM4Q8NFZ8 388 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 OR8D1Q8WZ84 308 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 FAM129BQ96TA1 746 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 C2orf49Q9BVC5 232 aaPredicted RBP14.61□□□□□ -0.07
HOXC9-202ENST00000504557 NEUROG2Q9H2A3 272 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 TNKS2Q9H2K2 1166 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 ATP13A1Q9HD20 1204 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 SUSD2Q9UGT4 822 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 OR51B4Q9Y5P0 310 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 SLCO1B1Q9Y6L6 691 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 IGLV3-10A0A075B6K4 115 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 BCAT2O15382 392 aaPredicted RBP14.6□□□□□ -0.07
HOXC9-202ENST00000504557 FTLP02792 175 aaPredicted RBP14.6□□□□□ -0.07
HOXC9-202ENST00000504557 SRCP12931 536 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 DESP17661 470 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 PSMA2P25787 234 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 HOXD12P35452 270 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 NOVA1P51513 510 aaKnown RBP14.6□□□□□ -0.07
HOXC9-202ENST00000504557 DNA2P51530 1060 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 ZNF143P52747 638 aaPredicted RBP14.6□□□□□ -0.07
HOXC9-202ENST00000504557 GSCP56915 257 aaPredicted RBP14.6□□□□□ -0.07
HOXC9-202ENST00000504557 OGDHQ02218 1023 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 ELAVL3Q14576 367 aaKnown RBP14.6□□□□□ -0.07
HOXC9-202ENST00000504557 PSAPL1Q6NUJ1 521 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 NCEH1Q6PIU2 408 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 LAYNQ6UX15 382 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.6□□□□□ -0.07
HOXC9-202ENST00000504557 LEKR1Q6ZMV7 388 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 SLFN11Q7Z7L1 901 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 SH2D3CQ8N5H7 860 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 MINDY1Q8N5J2 469 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 AADATQ8N5Z0 425 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 OR14C36Q8NHC7 312 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 FRS2Q8WU20 508 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 BIRC7Q96CA5 298 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 ZNF653Q96CK0 615 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 TBC1D31Q96DN5 1066 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 TTYH3Q9C0H2 523 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 CAPN10Q9HC96 672 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 NDFIP2Q9NV92 336 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 GPATCH2LQ9NWQ4 482 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 AIPL1Q9NZN9 384 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 ACTL7AQ9Y615 435 aa14.6□□□□□ -0.07
HOXC9-202ENST00000504557 CACNA1AO00555 2505 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 A0A1B0GTW7 788 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 TCRBV5S1A1TA0A578 114 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 DDX3XO00571 662 aaKnown RBP eCLIP14.59□□□□□ -0.072e-7■■■■■ 33.6
HOXC9-202ENST00000504557 ARHGAP33O14559 1287 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 GIPC1O14908 333 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 SMAD6O43541 496 aaKnown RBP14.59□□□□□ -0.07
HOXC9-202ENST00000504557 LRIG2O94898 1065 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 ADH1BP00325 375 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 SYPP08247 313 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 ACVRL1P37023 503 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 CSNK1EP49674 416 aaKnown RBP14.59□□□□□ -0.07
HOXC9-202ENST00000504557 FOXK2Q01167 660 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 GNA12Q03113 381 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 ARID5BQ14865 1188 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 EFHC2Q5JST6 749 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 ACBD5Q5T8D3 534 aaPredicted RBP14.59□□□□□ -0.07
HOXC9-202ENST00000504557 TMC6Q7Z403 805 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 DCAF4L2Q8NA75 395 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 RNF214Q8ND24 703 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 DEFB124Q8NES8 71 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 GRIN3AQ8TCU5 1115 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 CENPIQ92674 756 aaPredicted RBP14.59□□□□□ -0.07
HOXC9-202ENST00000504557 CNPY3Q9BT09 278 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 SYT11Q9BT88 431 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 SGK2Q9HBY8 427 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 TMEM51Q9NW97 253 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 CNOT8Q9UFF9 292 aaKnown RBP14.59□□□□□ -0.07
HOXC9-202ENST00000504557 PCSK1NQ9UHG2 260 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 SARDHQ9UL12 918 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 SCML1Q9UN30 329 aa14.59□□□□□ -0.07
HOXC9-202ENST00000504557 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.59□□□□□ -0.07
HOXC9-202ENST00000504557 TBC1D3DA0A087WVF3 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3IA0A087WXS9 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3EA0A087X179 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3KA0A087X1G2 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 A0A1B0GVT2 93 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 ILVBLA1L0T0 632 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3FA6NER0 549 aaPredicted RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 PCNX2A6NKB5 2137 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3LB9A6J9 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 KPNA3O00505 521 aaPredicted RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 ATP9BO43861 1147 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 OPHN1O60890 802 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 RTN2O75298 545 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 KCNK5O95279 499 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms