RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 CD70P32970 193 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 ATP5C1P36542 298 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 UBA7P41226 1012 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 PPP3CCP48454 512 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 STK19P49842 368 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 TUBP50607 506 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 NDST1P52848 882 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 GALCP54803 685 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 ADPRHP54922 357 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 UCNP55089 124 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 RACK1P63244 317 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 TRPC3Q13507 836 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CAMK2GQ13555 558 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 ENPP2Q13822 863 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 TGIF1Q15583 401 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 IGFBP7Q16270 282 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CDKN3Q16667 212 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 LINC00303Q3SY05 128 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 SFMBT2Q5VUG0 894 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 MBLAC2Q68D91 279 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 OR6B2Q6IFH4 312 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 GUSBP11Q6P575 273 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 RFWD3Q6PCD5 774 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CCDC81Q6ZN84 652 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 MMS22LQ6ZRQ5 1243 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CLEC20AQ6ZU45 233 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 HTR3DQ70Z44 454 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 RSRC2Q7L4I2 434 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 ZNF720Q7Z2F6 126 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 KANSL1Q7Z3B3 1105 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 LIMS2Q7Z4I7 341 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 SCD5Q86SK9 330 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 ATG4DQ86TL0 474 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 NT5DC4Q86YG4 428 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 JAMLQ86YT9 394 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 AADATQ8N5Z0 425 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 DCBLD1Q8N8Z6 715 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 RBBP8NLQ8NC74 664 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 LSM14AQ8ND56 463 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 OR14C36Q8NHC7 312 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 IFI44Q8TCB0 444 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 PLEKHO2Q8TD55 490 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 JPH3Q8WXH2 748 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 OVCA2Q8WZ82 227 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 RNF31Q96EP0 1072 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 MYEOVQ96EZ4 313 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 KLHDC7BQ96G42 594 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 EPSTI1Q96J88 318 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 PIWIL1Q96J94 861 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 PRICKLE1Q96MT3 831 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 TSPAN18Q96SJ8 248 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 YIPF2Q9BWQ6 316 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CALN1Q9BXU9 219 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 EPN3Q9H201 632 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 NEUROG2Q9H2A3 272 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 RASSF4Q9H2L5 321 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 PABPC3Q9H361 631 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 TLR8Q9NR97 1041 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 THSD1Q9NS62 852 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.78□□□□□ -1.8
USP46-205ENST00000504078 FBXL12Q9NXK8 326 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 HSPBP1Q9NZL4 362 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 EHD2Q9NZN4 543 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 KCND2Q9NZV8 630 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 STIM2Q9P246 746 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 ADAMTS1Q9UHI8 967 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 GGA2Q9UJY4 613 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 AGO1Q9UL18 857 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 EXOC7Q9UPT5 735 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 NFE2L3Q9Y4A8 694 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 SPENQ96T58 3664 aaKnown RBP3.77□□□□□ -1.81
USP46-205ENST00000504078 NAV2Q8IVL1 2488 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 CABIN1Q9Y6J0 2220 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 A0A087X0B3 334 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 LY6G6EA0A0G2JKS1 128 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 GOLGA6L7A0A1B0GV03 622 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 FAM95CA0A1B0GW59 222 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 A1L4Q6 167 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 CPED1A4D0V7 1026 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 TTC34A8MYJ7 566 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 HHLA1C9JL84 531 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 K7ENP7 123 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 TLR4O00206 839 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 TULP2O00295 520 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 SCAMP1O15126 338 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 PAPSS1O43252 624 aaPredicted RBP3.77□□□□□ -1.81
USP46-205ENST00000504078 OPA1O60313 960 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 TBL1XO60907 577 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 TACC1O75410 805 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 CYBBP04839 570 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 GP1BBP13224 206 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 WT1P19544 449 aaPredicted RBP3.77□□□□□ -1.81
USP46-205ENST00000504078 TGM2P21980 687 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 GARTP22102 1010 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 ACP1P24666 158 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 CASP1P29466 404 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 BUD31P41223 144 aaPredicted RBP3.77□□□□□ -1.81
USP46-205ENST00000504078 PIK3CAP42336 1068 aa3.77□□□□□ -1.81
USP46-205ENST00000504078 ARRB1P49407 418 aaPredicted RBP3.77□□□□□ -1.81
USP46-205ENST00000504078 CLDN2P57739 230 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms