RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 MSANTD2Q6P1R3 559 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 SIX6OS1Q8N1H7 587 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 CFAP52Q8N1V2 620 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 ANKRD20A12PQ8NF67 263 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 CRACR2AQ9BSW2 395 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 TAB2Q9NYJ8 693 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 HESX1Q9UBX0 185 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 CYTH4Q9UIA0 394 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 CEP83Q9Y592 693 aa16.29■□□□□ 0.2
DDR1-250ENST00000503628 BECN2A8MW95 431 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 SLC28A2O43868 658 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 RTN2O75298 545 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 WISP1O95388 367 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 TPM2P07951 284 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 CDK11BP21127 795 aaKnown RBP16.28■□□□□ 0.2
DDR1-250ENST00000503628 DGKAP23743 735 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 LSSP48449 732 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 TBX4P57082 545 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 DAOAP59103 153 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 ERVPABLB-1P60509 514 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
DDR1-250ENST00000503628 OVGP1Q12889 678 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 CDH18Q13634 790 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 IQCB1Q15051 598 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 TRIM65Q6PJ69 517 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 ARHGEF19Q8IW93 802 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 CCDC117Q8IWD4 279 aaPredicted RBP16.28■□□□□ 0.2
DDR1-250ENST00000503628 APCDD1Q8J025 514 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 OR4C6Q8NH72 309 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 SNRNP27Q8WVK2 155 aaKnown RBP16.28■□□□□ 0.2
DDR1-250ENST00000503628 AZIN2Q96A70 460 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 MED8Q96G25 268 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 DEPDC7Q96QD5 511 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDR1-250ENST00000503628 DPH1Q9BZG8 443 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 OSBPL2Q9H1P3 480 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 POLR1BQ9H9Y6 1135 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 UCKL1Q9NWZ5 548 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 LIMA1Q9UHB6 759 aaKnown RBP16.28■□□□□ 0.2
DDR1-250ENST00000503628 DMTF1Q9Y222 760 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 CA5BQ9Y2D0 317 aa16.28■□□□□ 0.2
DDR1-250ENST00000503628 A0A1B0GVM2 712 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 TYW5A2RUC4 315 aaKnown RBP16.27■□□□□ 0.2
DDR1-250ENST00000503628 FFAR2O15552 330 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 CSO75390 466 aaKnown RBP16.27■□□□□ 0.2
DDR1-250ENST00000503628 GABBR2O75899 941 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 MOCS3O95396 460 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 MYF5P13349 255 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 VAV1P15498 845 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 SLC9A1P19634 815 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 STK19P49842 368 aaPredicted RBP16.27■□□□□ 0.2
DDR1-250ENST00000503628 GCNT1Q02742 428 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 POM121L1PQ3SYA9 428 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 HS1BP3Q53T59 392 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 RNF219Q5W0B1 726 aaPredicted RBP16.27■□□□□ 0.2
DDR1-250ENST00000503628 SCML4Q8N228 414 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 KCTD13Q8WZ19 329 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 KLHDC7BQ96G42 594 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 VCPIP1Q96JH7 1222 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 DDX50Q9BQ39 737 aaKnown RBP16.27■□□□□ 0.2
DDR1-250ENST00000503628 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
DDR1-250ENST00000503628 VPS16Q9H269 839 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 KDM4CQ9H3R0 1056 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 CAAP1Q9H8G2 361 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 ASCL3Q9NQ33 180 aa16.27■□□□□ 0.2
DDR1-250ENST00000503628 COL12A1Q99715 3063 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 LRRC10BA6NIK2 292 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 PRAMEF26H0Y7S4 382 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 PIK3R2O00459 728 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 LUC7L3O95232 432 aaKnown RBP16.26■□□□□ 0.19
DDR1-250ENST00000503628 CKMT1AP12532 417 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 CD19P15391 556 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 PON1P27169 355 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 NUDT1P36639 197 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 NUMBP49757 651 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 RGS7P49802 495 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 COPB1P53618 953 aaKnown RBP16.26■□□□□ 0.19
DDR1-250ENST00000503628 ELAVL3Q14576 367 aaKnown RBP16.26■□□□□ 0.19
DDR1-250ENST00000503628 DCAF6Q58WW2 860 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 MS4A13Q5J8X5 152 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 KIAA1614Q5VZ46 1190 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 RRAGAQ7L523 313 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 UBR7Q8N806 425 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 KAT5Q92993 513 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 FAM131CQ96AQ9 280 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 FCRL2Q96LA5 508 aaPredicted RBP16.26■□□□□ 0.19
DDR1-250ENST00000503628 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
DDR1-250ENST00000503628 PLRG1O43660 514 aaKnown RBP16.25■□□□□ 0.19
DDR1-250ENST00000503628 GIMD1P0DJR0 217 aa16.25■□□□□ 0.19
DDR1-250ENST00000503628 ATP1A3P13637 1013 aa16.25■□□□□ 0.19
DDR1-250ENST00000503628 ENOSF1Q7L5Y1 443 aa16.25■□□□□ 0.19
DDR1-250ENST00000503628 LUZP1Q86V48 1076 aa16.25■□□□□ 0.19
DDR1-250ENST00000503628 TRIM69Q86WT6 500 aa16.25■□□□□ 0.19
DDR1-250ENST00000503628 FAM81BQ96LP2 452 aa16.25■□□□□ 0.19
DDR1-250ENST00000503628 KREMEN1Q96MU8 473 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms