RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 HEBP1Q9NRV9 189 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 HPCAL4Q9UM19 191 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 COL4A3Q01955 1670 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 TCF20Q9UGU0 1960 aaKnown RBP20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 CBX4O00257 560 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 CCNCP24863 283 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 RBL1P28749 1068 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 CHRNA3P32297 505 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 COILP38432 576 aaPredicted RBP20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 PFKPQ01813 784 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 PRKD1Q15139 912 aaPredicted RBP20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 PITRM1Q5JRX3 1037 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 ADIPOR2Q86V24 386 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 QKIQ96PU8 341 aaKnown RBP eCLIP20.85■□□□□ 0.932e-6■□□□□ 11
CDC42SE2-206ENST00000503291 SLC2A4RGQ9NR83 387 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 DRG1Q9Y295 367 aaKnown RBP20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 BCLAF3A2AJT9 711 aaKnown RBP20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 SNAP91O60641 907 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 EIF2DP41214 584 aaKnown RBP20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 ZNF33AQ06730 810 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 FUT11Q495W5 492 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 GRAMD4Q6IC98 578 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 CCDC13Q8IYE1 715 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 AHI1Q8N157 1196 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 DCAF4L2Q8NA75 395 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 C2orf49Q9BVC5 232 aaPredicted RBP20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 SP110Q9HB58 689 aa20.84■□□□□ 0.93
CDC42SE2-206ENST00000503291 PRAMEF11O60813 436 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 ITGAVP06756 1048 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 VAV1P15498 845 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 IL10RBQ08334 325 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 DMC1Q14565 340 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 IER5LQ5T953 404 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 TMEM215Q68D42 235 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 CDKL3Q8IVW4 592 aaPredicted RBP20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 CCDC105Q8IYK2 499 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 ATL2Q8NHH9 583 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 PNKPQ96T60 521 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 KRT12Q99456 494 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 USP29Q9HBJ7 922 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 PIAS3Q9Y6X2 628 aa20.83■□□□□ 0.93
CDC42SE2-206ENST00000503291 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 SPECC1L-ADORA2AF8WAN1 911 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 ZMPSTE24O75844 475 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 CTHP32929 405 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 FNTAP49354 379 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 KDSRQ06136 332 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 HEATR6Q6AI08 1181 aaKnown RBP20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 TIGD7Q6NT04 549 aaPredicted RBP20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 LEKR1Q6ZMV7 388 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 PHTF2Q8N3S3 785 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 HTR3CQ8WXA8 447 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 ACDQ96AP0 544 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 CCDC114Q96M63 670 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 PDFQ9HBH1 243 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 FBRSL1Q9HCM7 1045 aaKnown RBP20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 VPS51Q9UID3 782 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 DUSP12Q9UNI6 340 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 SORCS3Q9UPU3 1222 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 SHROOM3Q8TF72 1996 aa20.83■□□□□ 0.92
CDC42SE2-206ENST00000503291 KCNK1O00180 336 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 MATN3O15232 486 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 KCNN4O15554 427 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 STIP1P31948 543 aaKnown RBP20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 GALK1P51570 392 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 ARF5P84085 180 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 FAM182AQ5T1J6 154 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 RALGPS2Q86X27 583 aaPredicted RBP20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 FAM71DQ8N9W8 422 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 C8orf33Q9H7E9 229 aaPredicted RBP20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 AMACRQ9UHK6 382 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 MIA3Q5JRA6 1907 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 SGK1O00141 431 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 PEX11BO96011 259 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 KCTD19Q17RG1 926 aaPredicted RBP20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 MBLAC2Q68D91 279 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 TXNDC11Q6PKC3 985 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 RNF135Q8IUD6 432 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 TERB1Q8NA31 727 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 WFIKKN2Q8TEU8 576 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 P2RY13Q9BPV8 354 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 PCYOX1Q9UHG3 505 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 FEZ2Q9UHY8 353 aaPredicted RBP20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 ACTL7AQ9Y615 435 aa20.82■□□□□ 0.92
CDC42SE2-206ENST00000503291 COL4A2P08572 1712 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 TBC1D3BA6NDS4 549 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 PRRT4C9JH25 899 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 KAT7O95251 611 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 CCNB1P14635 433 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 POLR2EP19388 210 aaKnown RBP20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 CLCN6P51797 869 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 NRLP54845 237 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 GDF10P55107 478 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 LMNB2Q03252 620 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 PREPLQ4J6C6 727 aaPredicted RBP20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 SLC44A4Q53GD3 710 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 LINGO4Q6UY18 593 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 GSTA5Q7RTV2 222 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 LRRN4CLQ8ND94 238 aa20.81■□□□□ 0.92
CDC42SE2-206ENST00000503291 TTC17Q96AE7 1141 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms