RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CAMKK2Q96RR4 588 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TM9SF2Q99805 663 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ANAPC2Q9UJX6 822 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 MED16Q9Y2X0 877 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CEP290O15078 2479 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 IPO13O94829 963 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 KCNH1O95259 989 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 EYA4O95677 639 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PDGFAP04085 211 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SERPINB9P50453 376 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FUNDC2Q9BWH2 189 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FBRSL1Q9HCM7 1045 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TP73O15350 636 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 VAPBO95292 243 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CCNYL3P0C7X3 344 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SLC1A4P43007 532 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 RPA4Q13156 261 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 UAP1L1Q3KQV9 507 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SLFN12LQ6IEE8 588 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TMPRSS11AQ6ZMR5 421 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ELMOD1Q8N336 334 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 C11orf65Q8NCR3 313 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ANKS1AQ92625 1134 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF597Q96LX8 424 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 RBM14Q96PK6 669 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 OSGEPL1Q9H4B0 414 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 EBF3Q9H4W6 596 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 INPP4BO15327 924 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CSN2P05814 226 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PEPDP12955 493 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 COL9A3Q14050 684 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 IPCEF1Q8WWN9 437 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 EIF2AK1Q9BQI3 630 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZBTB24O43167 697 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 LRRN2O75325 713 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CD63P08962 238 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PUM3Q15397 648 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 C12orf57Q99622 126 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 EGFL8Q99944 293 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FAM49BQ9NUQ9 324 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TMEM9Q9P0T7 183 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZHX2Q9Y6X8 837 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SRP72O76094 671 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 GALK2Q01415 458 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CDH18Q13634 790 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 USP43Q70EL4 1123 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TPH2Q8IWU9 490 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 EMC1Q8N766 993 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 OR5T2Q8NGG2 359 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 DDX1Q92499 740 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 GTF2H4Q92759 462 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 MTMR10Q9NXD2 777 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ATP6AP2A0A1C7CYW4 349 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TEX46H3BTG2 121 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 WWP2O00308 870 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 H2AFYO75367 372 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF37AP17032 561 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 RAB5CP51148 216 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 AP3S2P59780 193 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PTGDRQ13258 359 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PLEKHG4Q58EX7 1191 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF605Q86T29 641 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FAM227BQ96M60 508 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FAM111AQ96PZ2 611 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 NMT1P30419 496 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 HNMTP50135 292 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 COASYQ13057 564 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CCNIQ14094 377 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF561Q8N587 486 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PEX13Q92968 403 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 GBA3Q9H227 469 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 DNAJC18Q9H819 358 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 LRRC72A6NJI9 287 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SHBGP04278 402 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 DBPQ10586 325 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 GNASQ5JWF2 1037 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SCYL2Q6P3W7 929 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CACUL1Q86Y37 369 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FTLP02792 175 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 NME5P56597 212 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 GSTO1P78417 241 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 METTL16Q86W50 562 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 OSCARQ8IYS5 282 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 OR7G2Q8NG99 324 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ALPK1Q96QP1 1244 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 THUMPD3Q9BV44 507 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 RNF32Q9H0A6 362 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 MTRRQ9UBK8 725 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 MEIS1O00470 390 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ADAP00813 363 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 GLDCP23378 1020 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SEPT12Q8IYM1 358 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ACTRT1Q8TDG2 376 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PPP3R2Q96LZ3 170 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CHCHD6Q9BRQ6 235 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FABP1P07148 127 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 GPC1P35052 558 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ANGPTL6Q8NI99 470 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 BAP1Q92560 729 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 C9orf72Q96LT7 481 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms