RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 ACE2Q9BYF1 805 aaPredicted RBP17.15■□□□□ 0.34
PRKCB-210ENST00000498739 NOL6Q9H6R4 1146 aaKnown RBP17.15■□□□□ 0.34
PRKCB-210ENST00000498739 PRDM16Q9HAZ2 1276 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 KLHL11Q9NVR0 708 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 DOCK4Q8N1I0 1966 aa17.15■□□□□ 0.34
PRKCB-210ENST00000498739 WDFY4Q6ZS81 3184 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
PRKCB-210ENST00000498739 RASA4BC9J798 803 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 RASA4O43374 803 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 BUB1O43683 1085 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 ATP9BO43861 1147 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 ZMPSTE24O75844 475 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 MT-CO1P00395 513 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 SRCP12931 536 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 VAV1P15498 845 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 SLC1A1P43005 524 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 VASPP50552 380 aaPredicted RBP17.14■□□□□ 0.33
PRKCB-210ENST00000498739 YBEYP58557 167 aaPredicted RBP17.14■□□□□ 0.33
PRKCB-210ENST00000498739 ARF5P84085 180 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 DPYSQ14117 519 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
PRKCB-210ENST00000498739 DLG2Q15700 870 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 PRR23BQ6ZRT6 265 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 TMPRSS6Q8IU80 811 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 UMODL1-AS1Q8N2C9 162 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 KCTD6Q8NC69 237 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 RLN3Q8WXF3 142 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 PRCCQ92733 491 aaPredicted RBP17.14■□□□□ 0.33
PRKCB-210ENST00000498739 PTPRN2Q92932 1015 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 SIPA1Q96FS4 1042 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 HMCESQ96FZ2 354 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 CELF6Q96J87 481 aaKnown RBP17.14■□□□□ 0.33
PRKCB-210ENST00000498739 SPACA7Q96KW9 195 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 CSPG4P5Q96PW8 444 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 FBRSQ9HAH7 460 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 HPCAL4Q9UM19 191 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 HS3ST2Q9Y278 367 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 HYOU1Q9Y4L1 999 aa17.14■□□□□ 0.33
PRKCB-210ENST00000498739 K7ERQ8 282 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 DCLK1O15075 740 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 SPOPO43791 374 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 BNIP3LO60238 219 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 BUB1BO60566 1050 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-210ENST00000498739 CD48P09326 243 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 ACADMP11310 421 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 TNNT1P13805 278 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 COMTP21964 271 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 AMPD1P23109 780 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 P2RY2P41231 377 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 MRE11P49959 708 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 NDST2P52849 883 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 NAP1L1P55209 391 aaKnown RBP17.13■□□□□ 0.33
PRKCB-210ENST00000498739 LPAL2Q16609 132 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 PARP15Q460N3 678 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 C9orf64Q5T6V5 341 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 LEKR1Q6ZMV7 388 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 Q6ZVU0 165 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 CCDC112Q8NEF3 446 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 FRS2Q8WU20 508 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 NKD2Q969F2 451 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-210ENST00000498739 FAM122AQ96E09 287 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 CALN1Q9BXU9 219 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 LACRTQ9GZZ8 138 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 EPC1Q9H2F5 836 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 SEMA4AQ9H3S1 761 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 GOLPH3Q9H4A6 298 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 CD93Q9NPY3 652 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 SALL4Q9UJQ4 1053 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 CYP8B1Q9UNU6 501 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 ACTL7AQ9Y615 435 aa17.13■□□□□ 0.33
PRKCB-210ENST00000498739 PROB1E7EW31 1015 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 PJA2O43164 708 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 SMAD6O43541 496 aaKnown RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 KDELR3O43731 214 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 RNASEH1O60930 286 aaKnown RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 ZNF217O75362 1048 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 SERPINH1P50454 418 aaKnown RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 ARSEP51690 589 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 CLCN6P51797 869 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 SLC20A2Q08357 652 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 DPYSL3Q14195 570 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 PDK2Q15119 407 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 ZNF776Q68DI1 518 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 C22orf39Q6P5X5 142 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 TMCO3Q6UWJ1 677 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 MAP7D3Q8IWC1 876 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 RHOT1Q8IXI2 618 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 STK40Q8N2I9 435 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 TXLNBQ8N3L3 684 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 FAM160A2Q8N612 972 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 NPWQ8N729 165 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 FRMD1Q8N878 549 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 NETO2Q8NC67 525 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 FAM71BQ8TC56 605 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 TSC1Q92574 1164 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 SLC39A8Q9C0K1 460 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms